Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_8_a1, TC72_RS18970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAAGCCGAAGGTCTGGATATGCGTTACTACAACGTGATCTACGACATCATCGAGGACGTCAAGAAGGCCCTGACCGGCATGCTCGGCAGCGATCTGCG GGAGAACATCCTGGGCATCGCCGAGGTGCGCGACGTGTTCCGCTCGCCGAAGTTCGGCGCGATCGCCGGCTGCATGGTCACCGAGGGCATGGTGCACCGC AACCGTCCGATCCGCGTGCTGCGCGACGACGTGGTCATCTTCGAAGGCGAGCTGGAGTCTCTCCGTCGCTTCAAGGACGACGTCGCCGAAGTGCGTGCCG GCATGGAGTGCGGCATCGGCGTGAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTGTTCGAGAAGGTCGAAGTCGCACGCAGCCTTTGATG GCGAGTGCGTAACCACAGCGCCCGGGCCGGCTTCCAGCTGTCCCGGGCGTTTGTCGCTTTTTTTTCCAGTGACCGGGTGTCGCTGGAGGCAGGTTGAAAA
DNA Sequence for Gene
>TC72_RS18970
ATGGCAAAAGACTACAGCCGTACCCAGCGTATCGGCGATCAGATGCAACGCGAACTGGCTCAACTGATCCAGCGCGAGATCAAGGACCCGCGCCTGGGCC TGGTCACCATCACCGGTGTCGAGGTCAGCCGCGACGTGGCGCACGCCAAGGTGTTCATCACCGTCATGGGCCAGGACGATGCCGGCAAGATCGCCCTGAA CATGGAAATCCTCAACGACGCCGCCGGCTACCTGCGCATGCTGCTGGGCAAGTCGATGAAGCTGCGCAGCGTGCCGCAACTGCATTTCCACTACGACGAA AGCATCCGCCGCGGCGCCGAGCTGTCGGCTCTGATCGAGCGTGCGGTGGCCGAAGACGGCCGCCGCCACGGCGACGACGAGACCGAGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTGGCCCAGGTGAAGCGTATCCGCCGCTCCATCAGCGGCATCCTGGTGCTCGACAAGCCGCGCGGCATGAGTTCCAACCAGGCACTGCAGAAAGTCCG CTGGCTGCTCAATGCCGAGAAGGCCGGCCACACCGGCAGCCTCGACCCACTGGCCACCGGGGTGCTGCCGCTGTGCTTCGGCGAGGCGACCAAGTTCTCC CAGTATCTTCTCGATGCCGACAAGGGTTACGAGACGGTGATGCGCATGGGCATCACCACCACCACCGGCGACGCCGAGGGCGAACTGCTCGCCGAGCGGG ACGTGACCGTCGGTCGGGACGATCTCGAACAGGCCCTGCCGCGCTTCCGTGGCGACATAGAGCAGGTGCCGCCGATGTACTCGGCGCTGAAGAAAGACGG ACAGCCGCTGTACAAGCTCGCCCGTGCAGGAGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTACGCGCCTGGATTTGCTCTCCTTCGAGCCGCCC
Amino Acid Sequence
>ribosome-binding factor A
MAKDYSRTQRIGDQMQRELAQLIQREIKDPRLGLVTITGVEVSRDVAHAKVFITVMGQDDAGKIALNMEILNDAAGYLRMLLGKSMKLRSVPQLHFHYDE SIRRGAELSALIERAVAEDGRRHGDDETED
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site