Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGAGCCGAAGACCGGCTTCATGCTGATCGACACCCTGCTTTCCGACGAACAGGGCTCGTTCCTCGATGCCGTGCGCCACCTGATCCTGCCGGCCATCG TGCTGGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGGCGATGCTCGAGGTGCTGCGCGAAGACTATGTGCGCACCGCCCGCGCCAAGGG CCTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATTCCGGTGCTGACGGTATTCGGCCTGCAGGTCGGCACGCTGCTCGCCGGC GCGGTGCTGACCGAAACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCCGTCGCGACTACCCGGTGGTGCAGAACGGCATCC TGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCGCGCATTCGCCACCAACGCTGAGGAGCCAGCCG
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DNA Sequence for Gene |
>NT81_RS16920
ATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAGGCCTTCGCGCACAACAAGGGCGCCC TCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTATTCGCCCCCTGGGTCGCCCCCTACGATCCGAGCGAGCAGTTCCGGGACTTCCTGCT GACCCCGCCATCCTGGCTGGAAGGCGGCCAGGCGCGCTTCCTGCTCGGCACCGACGAGCTGGGCCGCGACCTGCTCTCGCGGCTGATCCACGGCGCCCGC CTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGATCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCGTGCCGGGCCGC TGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCGGGCCTGATCAACACCGTGAT CGCCATCGCCATCGTCTCGCTGCCGGCCTACGTACGCCTGACCCGCGCCGCGGTGATGACCGAGCTAAACCGCGACTACGTCACCGCCTCGCGCCTGGCC GGCGCCGGCACCCTGCGACTGATGTTCGTCTGCGTGCTGCCGAACTGCATGGCGCCGCTGATCGTCCAGGCCACCCTGAGCTTCTCTTCGGCGATCCTCG ACGCCGCCGCCCTCGGCTTCCTCGGCCTCGGCGTGCAACCGCCGACCCCCGAGTGGGGCACCATGCTCGCCTCCGCCCGCGACTACATCGAGCGCGCCTG GTGGGTGGTCAGCCTGCCCGGCCTGACCATCCTGCTCAGCGTACTGGCGATCAACCTGATGGGCGACGGCCTGCGCGACGCCCTCGATCCGAAACTGAAG AACGCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCACAACCATGAACAGCGCATCCGTATCCGTGCCACAGGAGACCGCCGCATGAGCCTCCTCGATATCAAGAACCTCAGCGTACGCTTCGGCGACACC ACCGCCGTGCCCGTGGTCGACGGCCTCGACCTGAGCGTCGACAAGGGCGAGGTGCTGGCCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGGTGACCATGA TGGCCCTGATGGGCCTGATCGACGCCCCCGGCTGGGTATCCGCCGATCACCTGCGCTTCGACGGCCACGACATGCTCACCCTCAAGGGCCGCCAGCGCCG GCGCATCGTCGGCAAGGACATGGCGATGGTCTTCCAGGACCCGATGACCGCCCTCAACCCCAGCTACACCGTCGGCTACCAGATCGAGGAAGTCCTCCGC CTGCATCTCGGCCTGCGCGGCAAGGCCCTGTGCCAGCGCGCCCTGGAACTGCTCGAACGGGTCGAGATCCCGGCCGCCGCCAGCCGCCTCGACGCCTACC
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Amino Acid Sequence |
>peptide ABC transporter
MNAMHNAPASDPSLVYPSPLKEFWQAFAHNKGALGGLLFMLLIVFCALFAPWVAPYDPSEQFRDFLLTPPSWLEGGQARFLLGTDELGRDLLSRLIHGAR LSLLIGLSSVVISLIPGILLGLLAGFSPNRAGPLIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPAYVRLTRAAVMTELNRDYVTASRLA GAGTLRLMFVCVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK NAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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