Strain | Pseudomonas aeruginosa BWHPSA037 adkgb-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGCGACATAATTTTTTCGTTTCTTAGAACCGTCCCTGGCTCGGCTCGCTCCACGACCGAACACGACATGCCGGCATGCCAGCGTTAATACTTTGGTATT AGGCCCTTGGTATTAACGTTAAATAACCGGTAAATATCCGGATTTTCTTTTCGTCGAATTTACGAGCAATATGAAACATATTTCGTTGAAATAAGCTCTT CTTTCACATAATTATAAAAATATCCTGAAACAGAGCCGTCATCCCTCACCTCCAAAACGACGACTCCCCGTGCCGTGCGCCCGCCGCGCAGAAAGCGAGC CGGCGGCCGATTCCACCCTCGCACGCCAGCCCTTGCGCTTCACTGACCGACGGGAGGTTTCCCCGATGAAAACGTCATCCAGAAGACAAGTTGAAACACT CGGGCGCTATCTATCGAGTCCTCGACGCTTCTTCCACAGTAGCGGCAACCTGACCCGATCAAGGGAAGCGGCACGCGCCACCCAATAAAAGGAATAAGGG
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DNA Sequence for Gene |
>Q042_RS08075
ATGCCTATTCATAACCTGAATCACGTGAACATGTTCCTCCAGGTCATCGCCTCCGGTTCGATTTCCTCCGCTGCGCGGATCCTGCGCAAGTCGCACACCG CGGTCAGCTCGGCGGTCAGCAACCTGGAAATCGACCTGTGCGTGGAGCTGGTCCGTCGGGACGGCTACAAGGTCGAACCCACCGAGCAGGCGCTTCGCCT GATCCCTTACATGCGCAGCCTGCTGAACTACCAGCAGCTGATCGGCGACATCGCCTTCAATCTCAACAAGGGTCCGCGCAATCTCCGGGTGTTGCTGGAC ACCGCCATCCCGCCGTCGTTCTGCGATACGGTGAGCAGCGTACTGCTCGACGATTTCAACATGGTCAGCCTGATACGCACCTCGCCCGCCGATAGCCTGG CGACGATCAAGCAGGACAACGCGGAAATCGATATCGCCATCACCATCGACGAGGAACTGAAGATCTCCCGCTTCAACCAGTGCGTGCTCGGCTACACCAA GGCGTTCGTCGTCGCCCATCCGCAGCACCCGTTGTGCAATGCCTCCCTGCACAGCATCGCGAGCCTGGCCAATTACCGGCAGATCAGCCTCGGCAGCCGC TCCGGGCAGCATTCGAACCTGCTGCGGCCGGTCAGCGACAAGGTGCTCTTCGTGGAAAACTTCGACGACATGCTGCGTCTGGTGGAAGCCGGCGTCGGAT GGGGCATCGCGCCGCATTATTTCGTCGAGGAACGCCTGCGCAACGGTACCCTGGCAGTCCTCAGCGAACTCTACGAACCGGGCGGCATCGACACCAAGGT GTATTGCTACTACAACACCGCGCTGGAGTCCGAGCGCAGCTTCCTGCGCTTTCTCGAAAGCGCCCGCCAGCGCCTGCGCGAACTCGGCCGCCAGCGTTTC GACGATGCGCCGGCCTGGCAACCGAGCATCGTCGAAACGGCGCAGCGCCGCTCAGGCCCGAAGGCGCTCGCGTACCGCCAGCGCGCCGCACCAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGTTCTCCAGCAGACGCTGGCCGTGGGTGGTGAGAATCGACTCGGGATGGAACTGCAAGCCCAGCTGTCGATTGCGCGGATCGGCCATCGCCATGATC TCGCCATCGGCATCGGCCAGGCAGTCGAAACCTTCCGGCAGGCGACTGACCACCAGCGAGTGGTAGCGCGCGACGCGCAGGTCAGCGATGCCGTCGAACA GCGGGTGACGCTGATCGAAACGCAGGGACGTGCTCTTGCCGTGCAGCGGCTTCCTCGCCTCGCCCACCGCGCCACCGGCGGCCAGCGCCAGCGCCTGGTG GCCGAGGCAGACGCCGAGCACCGGCAAGCGCCCGCGGGCCCAGGCGAGCAATTCCAGCATGCAGCCGGCGTCTTCCGGCCGACCGGGCCCCGGCGACAGC ACCAGCAGTTCGCAACCGTCGGCCAGCAATGCCGCCTGGATCGTCGGCAACGGCGTATCGTTGCGCATCACCCGGACCTCCGCGCCGAGCAGGCAGAACT
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Amino Acid Sequence |
>transcriptional regulator MvfR
MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEIDLCVELVRRDGYKVEPTEQALRLIPYMRSLLNYQQLIGDIAFNLNKGPRNLRVLLD TAIPPSFCDTVSSVLLDDFNMVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQHPLCNASLHSIASLANYRQISLGSR SGQHSNLLRPVSDKVLFVENFDDMLRLVEAGVGWGIAPHYFVEERLRNGTLAVLSELYEPGGIDTKVYCYYNTALESERSFLRFLESARQRLRELGRQRF DDAPAWQPSIVETAQRRSGPKALAYRQRAAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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