Pseudomonas oryzihabitans NBRC 102199, POR01S_RS12405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTACAAGGTGCAGCAGGGCACGCTCAAGGACAGTCGCTTCCGCCTGCTGCTGACCGATCACCGCGCCAGCCAGAACCAGGTCGACGGCAACGTCAAGGA GCTGCGCCTGGTCTCCACCCTGCCGTTCAACCTGCTGTGATGACGAAACCCGGCGGATTTCGTGCAGCGCCCGGCATCTCGCCGGGATCGCGTCGCGAAC ACCGGCGAAGCCCTGGCCATGTCGAGGATATCGACGGCCGTGGCAACGTGGTAGTCTGCCGGGTTTGGAGCGCTGGCCCAGAGCGCTCTTCGAACCTATT CGTAGGACCGAACGAGGCTGCCGCTGGCAGGCCGCGTTCGTCGCGGACCAGGACGGTCCGCGCAGGGATGAATCCGGACCCACAAGGTCTGAGAGTCAGA TCAAAAGCCTGCGGGCTTTTGAGCGGGCTTTCACTTAAAAACGCGGCCGGGCACGTACTCGCGCCGTCTTGATCAGCCTCAAGAGGAGATACCCCCTCCG
DNA Sequence for Gene
>POR01S_RS12405
ATGCTCGCCTTCATCGCCCGTCGCTTCGGGCTGCTGATACCGACGTTCTTTGGCGTCACCCTGCTGACCTTCGCCCTGATCCGCCTCATCCCCGGCGATC CGGTGGAAGTCATGATGGGCGAACGCCGCGTCGATCCGCAGATGCACGCCGAAGCCATGCACCGCCTGGGCCTCGACAAGCCCCTGTACCAGCAGTATTT CGACTACATCGGCAATCTCGCCCAGGGCAACCTCGGCGAATCCCTGCGCAGCCGCGTCGGGGTCTGGGACGAATTCCTGACCCTGTTCCCGGCCACCCTG GAACTCTCGGTGGCGGCCATGCTGTTCGCCACGGTGTTCGGCGTGCTGGCCGGCATCATCGCCGCCCTCAGGCGCGGCTCCACGGTGGACCACGGGGTGA TGGGCGTGGCCCTGACCGGCTACTCCATGCCGATCTTCTGGTGGGGCCTGCTGCTGATCATGCTGTTCTCGGTGCAGCTCGGCTGGACCCCGGTCTCCGG TCGTCTGGACCTGCTCTACGACATCCCGCCGCGCACCGGCTTCATGCTCATCGACACCCTGCTCTCCGACGAGCCCGGCGCCTTCGTCGATGCCCTCAAG CACCTGATCCTGCCGGCCATCGTGGTGGGCACCATTCCCCTGGCGGTGATCGCGCGCATGACCCGCTCGGCCATGCTCGAAGTGCTGCGCGAGGACTATG TGCGCACCGCTCGCGCCAAGGGCCTGTCGCCCAAGCGGGTGGTCTTCGTCCACGCCCTGCGCAACGCCCTGATCCCGGTGCTGACCGTGCTCGGCCTGCA GGTCGGTAGCCTGCTCTCCGGCGCGGTGCTCACCGAAACCATCTTTTCCTGGCCCGGCATCGGCAAGTGGCTGATCGAGGCCATCGGCGCCCGGGACTAC CCGGTGGTGCAGAACGGCATCCTGCTGATCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGTCAATCCGCGCATCCGCC ACCAGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCCCAAACGGACAGAGCCTATGACAACGGTAAACACCCCGGCCGCTCAAGACCCGAGCGCCCTCTACCCCTCCCCCTTCAAGGAGTTCTGGCACGCC TTCGCCCGCAACAAGGGCGCCCTTGGCGGGCTGATCTTCATGGTCATCGTGGTGTTCTGCGCGCTCTTCGCGCCCTGGGTCGCCCCCCATGCGCCCAGCG AGCAATTCCGCGACTTCATGCTCACCCCGCCACTATGGCTGGATGGCGGCAACAGCCAGTTCCCGCTGGGCACCGACGAGCTGGGGCGTGACCTGCTCAG CCGACTGATCCACGGCGCCCGGCTGTCGCTGCTGATCGGCCTGGCCTCGGTGGTCTTCTCGCTGATCCCCGGCATCCTGCTCGGCCTGGTCGCCGGCTTC TCGCCCAATCGCGCCGGTCCGGTGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCCTCGCTGCTGCTGGCCGTGGCCATCGTCGCCATCCTCGGCC
Amino Acid Sequence
>peptide ABC transporter permease
MLAFIARRFGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRVDPQMHAEAMHRLGLDKPLYQQYFDYIGNLAQGNLGESLRSRVGVWDEFLTLFPATL ELSVAAMLFATVFGVLAGIIAALRRGSTVDHGVMGVALTGYSMPIFWWGLLLIMLFSVQLGWTPVSGRLDLLYDIPPRTGFMLIDTLLSDEPGAFVDALK HLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPKRVVFVHALRNALIPVLTVLGLQVGSLLSGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIATLVILVNFVVDILYGLVNPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site