Strain | Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCACCGACGCGCGCGGCACCGGCCTGGGCGACACGGCGCCCAGCCTGCGGGTGGCCATGCGTGCCCGCGAGCTGGTGTTCCTGGTGCGCGGCAGCGCGC CCTATCAACTGGCCCTCGGCAAGCGCGACGCCACCTCCGCCAGCCTGCCGCTGAGCGTGCTGATCCCCGGCTACCAGCCGGACAAGCCGGCCCAGGTCGG CCAGGCCAGCCTGGACGGGGCCTTGCAGGCCGCTCCGGCGGAAGCCGCCAGCGCCGGCGACGGCAATTGGAAGCGCATCGGCCTGTGGGCCGTATTGCTG GGCGGGGTGCTGCTGCTGGGCGGCATGGCCTTCAGCCTGCTGCGCGGGCAGCGCGCCGGCCAATGAGCAAATACCGGGAAATGGAGAAATTACGCCAGCT TATGTAGGGAAATGCGTCAAGAACGCTACTCTGCGCGATTGTTCTGATACTGTTAACGGCGTTGCACTCTACCTATAAGAACAAGCATGGAGTCAGCCGC
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DNA Sequence for Gene |
>PM1_RS01740
ATGATCAAACAGGTGCTTTCACCCCTGGCCGCCGCTTGCCTGCTCGGCATCGCCAGCCAGGCCCTGGCGTCACCTTCCCCGTATTCGACCCTGGTGGTGT TCGGCGACAGCCTCAGCGACGCCGGCCAGTTCCCCGACGCCGACGGCCCCGCCGGCGCCTCCACCCGCTTCACCAACCGCGTGGGACCGACCTATCTGGA CGGCAGCGGCGAGGTCTTCGGGCCTACCGCGGCGATGATCCTCGGCGGCAAGCTGGGCGTCGCCGCCGGCGACCTCGGCCCCTCGACCTCGCTGGTGAAC GCCGCCGAAGGCCTGCCGGACGGCAACAACTGGGCGGTGGGTGGCTACCGCACCGACCAGATCTACGACTCCATCACCGCCGCCGGCGGCTCGGTGGTCA GCGCCAACGGCCAGACGCGCACCCGTGACGGCTACCTGGTCGGCCGCCTCGCCGATCCCAACGCGCTCTACTACCTCACCGGCGGCGGCAACGACTTCCT GCAGTTCCGCATCACCGACGACCCCTCCGCCCGCGCCGCCGCCGGGCGCCTGGTGGACAGCGCCCAGGCCCTGAGCCAGGCCGGCGCGCGCTACATCATG GTCTGGCTGCTGCCCGACCTGGGCCTCACCCCGGCCACCAACGGCACCGTCCTGCAGAGCTTCGGCACCCAGCTCAGCGGCATTTTCAACGAGGAGCTGG TCAGCCAGTTGGCCAGCAGCGGCGCCAACGTGATCCCGCTGAACATCCCGCTGATGCTCCAGGAAGTGCTGGCCGATCCCGGCGCCTATGGCCTGGCCAC CGGACAGAACCTGGTGGGCACCTGCTTCAGTGGCAACAGCTGCCCGGAAAACCCGGTCTACGGCCGCCACGGCAGCAGCCCCGACCCGACCAAGCTGATC TTCAACGATGGCGTGCACCCGACCATCGCCGGCCAGACGCTGATCGCCGATTACGCCTACTCGGTGCTGTCCGCGCCCTGGGAGGCCACCCTGCTGCCGG AAATGGCCCACGGCACCCTGCGCGCCTACCAGGACGAGCTGCGCAGCCAGTGGCTGGCCGACTGGGAGAACTGGCAGGGCGTCGGCCAGTGGCGTGGCTT CGTCACCGGCGGCGGCCAGCACCTGGACTACGACGACCAGGACAGCGCCGCCAGCGGCGACGGCTTCGGCTACAACCTGACCCTGGGCGGCTCGCTGCGC CTGGACGACGCCTGGCGCGCCGGCATCGCCGCCGGTTTCTACCGGCAGAAACTGGAGGCCGGCGCCGAGGATTCCGACTACAAGCTCAACAGCTACCTGG GCAGCCTCTTCGTGCAGTACCAGCAGGATCGCTGGTGGGGCGACGCCGCGGTGACCGGCGGCTACCTCGACTACGACGAGGCCAACCGCAAGTTCGCCAT CGGCCCGCGCACCGTCGAGGAGAAGGGCGACACCAACGGCAACCTGCTCGCCTTCAGCGGCCGGATCGGCTACGACATCGCCCAGGGCGGCGAGGCCTGG CACCTGTCGCCCTTCGTCAGCGCCGACTGGGCGCGGGTGAAGGTGGACGGCTACGACGAGGGCAACGCTTCCACCTCGCTGTCGTTCGACGAGCAGATGC GCTACTCCCGCCGCCTTGGCGTGGGCCTGCAGGGCAAGTACGCGCTCAGCGAGCAGACCCAGCTGTTCGGCGAAGTGGCGGTGGAGCGCGAATACGCCGA CGACACCCAGAACATCGGGATGGCCTTCACCAGCCTGCCGGCCAACGGCTTCACCCTGCAGGGCTACACCCCGCAGAGCCACCTGCAGCGCGCGACCCTG GGCTTCGCCCGGAAGCTGACCCCGGAACTCTCGCTGCGCGGCGGCTACAGCGCGCACCGCAGCGACGACGACCTGCAGCAGGGCGTGAGCCTGGCGCTGA GCCTGGACTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGGTACGCCAGGAAGCCGCCGCGACTGACGGCCGCAGCGACGAGGGAACCGACCACCGGCGGCGCGCTCCAACCTCAGGACGGACGCGCCGTACGGG AGGCGGCGTGGCCGATTCCACGCTAGAATGCGCGCAGTTTTTTTCCTACCTCTCCCCCGGAGCCCTTCCATGTCCCGCGTTACCCTCAGCCGCTACCTCA TCGAGCAGACCCGCAGCCACAACACCCCGGCCGACCTGCGCTTCCTCATCGAGGTGGTGGCGCGTGCGTGCAAGGAAATCAGCCATGCCGTGTCCAAGGG CGCCCTGGGCGGCGTGCTGGGCAGCATGGGCACCGAGAACGTACAGGGCGAGGTGCAGAAGAAGCTGGACGTGATGTCCAACGAAATCCTCCTGGAAGCC AACGAGTGGGGCGGCCACCTGGCCGGCATGGCCTCCGAGGAGATGGACAACGCCTACCAGATCCCCGGCAAGTACCCCAAGGGCGCCTACCTGCTGGTGT
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Amino Acid Sequence |
>esterase
MIKQVLSPLAAACLLGIASQALASPSPYSTLVVFGDSLSDAGQFPDADGPAGASTRFTNRVGPTYLDGSGEVFGPTAAMILGGKLGVAAGDLGPSTSLVN AAEGLPDGNNWAVGGYRTDQIYDSITAAGGSVVSANGQTRTRDGYLVGRLADPNALYYLTGGGNDFLQFRITDDPSARAAAGRLVDSAQALSQAGARYIM VWLLPDLGLTPATNGTVLQSFGTQLSGIFNEELVSQLASSGANVIPLNIPLMLQEVLADPGAYGLATGQNLVGTCFSGNSCPENPVYGRHGSSPDPTKLI FNDGVHPTIAGQTLIADYAYSVLSAPWEATLLPEMAHGTLRAYQDELRSQWLADWENWQGVGQWRGFVTGGGQHLDYDDQDSAASGDGFGYNLTLGGSLR LDDAWRAGIAAGFYRQKLEAGAEDSDYKLNSYLGSLFVQYQQDRWWGDAAVTGGYLDYDEANRKFAIGPRTVEEKGDTNGNLLAFSGRIGYDIAQGGEAW HLSPFVSADWARVKVDGYDEGNASTSLSFDEQMRYSRRLGVGLQGKYALSEQTQLFGEVAVEREYADDTQNIGMAFTSLPANGFTLQGYTPQSHLQRATL GFARKLTPELSLRGGYSAHRSDDDLQQGVSLALSLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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