Pseudomonas aeruginosa PAO1-VE13, N297_4650

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	paev02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12911	N-terminal TM domain of oligopeptide transport permease C	IPR025966	Oligopeptide transport permease C-like, N-terminal domain	18	70	1.1E-14
PANTHER	PTHR43386	OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC	-	-	23	299	1.6E-91
FunFam	G3DSA:1.10.3720.10:FF:000007	Dipeptide ABC transporter permease DppC	-	-	89	296	5.8E-105
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	89	296	2.5E-24
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	94	281	4.32E-29
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	99	281	5.85631E-22
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	117	300	9.9E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.