Pseudomonas aeruginosa AZPAE14842, NR60_RS11075 (fecE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGCCCTGCGCCTCCAGCTCCGCACGGTATGGCGCGGCGCTGTCGGCGCCGGTGGCGGAGGCGACCAGCAGGTCCGGATCCTAGGCGATCACCGCTTCGA TGTCGAAGCGCAGGTTGCGGTAGAGCACCTCGACGCCACGTTGGTCGGCGACCTTCGCCCATTGCGAGAAGAAGCCCTTGGCGTCGGTCAGGCGACTTGG CGTGGTGGCGGCGCTGGCCACCAGCGGTGCGTCCATCGCCAGCAGGATGCCGGTGACGCTCGGGGTGGTGGAGACGATCCGCGCCGGCTTCGGCTCCCCG GCCGCGGCGAGGGTGGCGAACAGGCTCAGGGCGAGGGCGAGTAACGGCAGGGCGGAGCGGCGGCGGGTCGGCATGAAGGCTGTTTTCGCTGTAGGGGAAG CCGGGCGGACGGATTCATATGATAATGCTTCTCATGCAGTCTATTCCATAATGTAGAATCGATTCCACATATTCGAGCCATTCTTATCCAGGAACCTCCC
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| DNA Sequence for Gene |
>NR60_RS11075
|fecE
ATGACCCATCGCCTGCACGCGGACGCCGTGACCTTGCGCCGCGACGCGCGGACCGTTTCGCGGAATCTCTCGCTGGCCATCCCCGAGGGTTCGTTCAGTG TGATCGTCGGGCCCAACGCCTGCGGCAAGTCGACCCTGCTGGCGGCATTGTCGCGCCTGTTGGCGCCGGCCGAGGGCCGGGTGGTGCTGGACGGCAGGGA TATCCACAGCCTGCCGGGACGGGAAGTGGCGCGGCGTCTCGGCCTGCTGCCGCAGAGCGCGCTGGCGCCGGATGGCATCACGGTGGCCGAGCTGGTGGCG CGCGGGCGCTATCCGCACCAGTCGTTCCTGCGCCAGTGGTCGCCGGCGGATGAGCGCGCGGTAGCGGCGGCGTTACGCGCCACGCGGGTCGACGGCCTGG CCGAGCGACCGCTCGACGCGCTCTCCGGCGGCCAGCGGCAACGCGTGTGGATCGCCATGGTGCTGGCGCAGGAAACCCCGTTGCTGCTGCTCGACGAGCC AACCACCTACCTGGATATCGTCCACCAGATCGAATTGCTCGAACTGCTCGCCGAGCTGAATCGCCAGGGGCGCACCATCGTCGCCGTGCTGCACGACCTC AACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGCGTGACGGCGCGATCCTCGCCGAGGGCGCGCCGGCGCATATCTTCACCGAGCGTCTGGTGG AGGAGGTGTTCGGCTTGCGCTCGTTGATCATCGCCGACCCGGTCAGCGGCACGCCGCTGCTGGTGCCGCGCGGGATCGCCGCCGACGCGCCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGGCTCAGCGCGGCGGCGGCCGCATGCCGGGGTGGAGGACCAGGCCACCGGTGGACTGGTTGACCTGCAGCGCCTCGTGGAACAGCGCGTCGCGGTCT TCCGCCGACTGCAACTGGCCGAGATCGGTCACCGTGGTCATGGCGCAGACGATCTCCTGCTGGGCGTCGAACACCGGCGCCGCCTGGCCGGTGACGTTCG ACAGCAGGTGGCTGGTCAGTTCGGCCCAGCAGCGCTCGCGCACCTCGTCGAGCAGCGCGCGGCTCGGCGGGCTGCCGCGGAAGTGCGTCGGTTGCTGCTT GCGCGCGGCGTCGACCACGGCCTTCGGCAGGAAGGCCTGGAACACCAGGCCGCAAGCGGTATTGTCGATGGGCAGGATATCGCCCAGGGCCAGCGGGTTG ATCGAGAAATAGGCGCTGCGGTACCAGCGCACCAGGGTCGGGCCGCGCTCGGTCCAGATCGCCACCCCGCCGCTGGCAGCATGCCGTTGGGCCAGGGCCT
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| Amino Acid Sequence |
>ABC transporter
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVA RGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDL NQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADAPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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