Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTTCCAGCAGCGGCGCCGGCATGCGCGGCGCGCCGCGCATGATCTCGCAGGAGAAGACTCTGGCCGCGTGCGGCCGCTCGGCGCCGATGCGCATCTT GTTGTCGACGTAGGCGCGTAGCGCCTCGGCGGGCGGCTGGTCGCCGGCGAATGGCCGGGAGGCTTCCAGCAGGGGCTCGACGATGCTGTCCAGCACCGCC TCGTAGAGTTGCGCCTTGGAGCGGTAGTAATAGAGCACGTTGGCCTTCGCCACGCCGGCGCGCTCGGCGACGTCGCTGAGCCGGGCGGCGCTGAAGCCGC AGTCGGCGAAGACTTCGCAGGCGGCGTCGAGGATCAGTTGCAGGTTGCGTTGGCGGATCTTCTTCATCGGGACCGATACGGGGCAGGTTTCGTTGTTAAT ATTTTTATATAACGAACGCCTTGTGCCTGGATAGTCGTCGTCAGGCCGGCGACGCTTGATCGGATGCGCATTGCCAAGCCGTGGGGGCGCTGGTATCTGT
|
|
DNA Sequence for Gene |
>NR65_RS19315
ATGCATGAACAGTACCAGGCTCCGCTACCCGTGAATTCCCCAGCGCTTCCCGAACCCTTCTACTACCTGCACAACTTCCGCGCGGTGCTCGCCTGGATCG GCGAACGCTATGCCGATCTGCTCGACGATCAGGAACGTGCCTTCATCGCCGCGTTCGCCGAGCTGCCCGAGGCCAGCCAGGCCCTGCTGGTGCGCATGGT GATGCGCAAGGGCACGCTGTTCCGCGAAGGCAAGCTGGCCTATGCCGAGATCGGCGACACGCGCGCCGCCGTGCAACCGCTGTTGGCATTGGGCTGGGTG GACGCGCAGCCGACCCTGGAACTGGCGCAACTGTTCGGCTTGCTGAAGAAGGACGAATTGTCGCAGCTGTTCAGGGACCATCTCGGGCGCGCGAACCTGC GCAAGGATGCGCTGCTGGAACGGCTCCAGCCGTTGTTCCCCGAGGCGCGGCGGCTCGCCGAGTGGCAGGCCGACTTCGCCGAACCGGTCTACGAGTTGCG CTGCATGGCGCTCTGCGACCGCTTGCGGTTGATGTATTTCGGCAACCTGTGGCAGGACTGGTCGGAGTTCGTCCTTGCCGACCTGGGTATCTATCGTTAC GAAAGCGTCGAGTTTTCCGCCGACTCTCGCGGCTTTCGCCTGCGCGCCGACGTCGACGCCTATCTCCACCTGTTCGACTGCCGCCAGCGCTTCGACCTCG GCGAGCCGCTGGAGGAACTGCTCGCCGGCCTGCCGGGCGAACCCTACGCCAATCCCTGGCTGGAAGGGCGGCGGGTCAAGCTGCTGTTCCAGTTCGCCCA GCACTGCGAAAAGCAGCGGGATTTCGACCTGGCCCAGCGGCTCTATCGCCAATCCAGCCACCCCGGCGCGCGCCTGCGGGCGATTCGCAGCCTGGAACGC GGCGAGCGCTTCGCCGAAGCCCATGCATTGGCGCGGGAGGCCAGCTGTGCGCCGGAAAGCGACGCCGAACGCCAGGGCCTGGCCCGATTGCTGCCGCGCC TGCAAGGCAAGCTCGGCCTGCCGCGACAGGCGCGGGCGGCGGCTCCGGAAATCGACCGCCTGGACCTGTGCCTGGCGTTCCCGAGCGAACCCTGTAGCGT CGAGTGGGCGGTTCGCGAGCACCTGAAAGAGCCCGGTTGCGCGGTGCACTACGTCGAGAACGGCCTGATCAATTCGCTGTTCGGGCTGCTCTGCTGGGAG GCGATCTTCGCCGCCATTCCCGGGGCGTTCTTCCATCCCTTCCACAGCGCGCCGGCGGACCTGCACAGCGCCGACTTCCGCCAGCGCCGCGCCGCCCTGT TCGAGGCCTGCCTGGGACGGCTGGAGGACGGCAGCTACCGCGACGCGATCCGCTGTCGCTACCGCGACAAGTTCGGCCTGCAGTCGCCCTTCGTCTACTG GGAACTGCTTGGCGAGGAACTGCTCGAACAGGCGCTCGATTGCCTGCCGGCGGCCCACCTGCGCGCCTGGTTCGAACGCCTGCTGGAGGATATCCCGGGC AACCGCGCCGGCCTGCCGGACCTGATCCAGTTCTGGCCGGCGCAGCGGCGCTACCGGATGGTCGAGGTCAAGGGACCGGGCGACCGCCTGCAGGACAACC AGTTGCGCTGGCTGCAATTCTGCCGCGAGCGGGAGATGCCGGTGGCGGTCTGCTACGTGCGCTGGCATGTCGATGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCAGGGCGGCGAGGCGCTGTACCAGGTGGCGGTGCGCGCGCTTTGCGAGTTCAGCGCCAAGCGCGGCGACCTCGACCTGCGCTTCACCCCGTCGCCCAGC GCCCTGGAAGGCATCGCCGGACATACCCTGGTGACCTCCCGGCGCCCCGCTCACTACCAGCGCGAAGTGGCGCTGGACGGACGCTACCGTCACTTGCAGG TGCGCGGCCGGGCGGATGGCTACGATCCGCAGGCGAACTGCCTGGAGGAAATCAAGACCCACCGCGGCGACCTCGCCCTGCAACCGGCCAACCACCGGCA CCTGCACTGGGCCCAGGCCAGGGTCTACGGCTGGCTGCTCTGCGCCGAACGGAAGCTGGAGGAAGTCGAACTGGCGCTGGTCTACCTGGAGGTCGGCAGC CAGAAGGAGACCCGCTTCGTAGAGCGGGTGCGGGCCGACGAGCTGCGGCTGTTCTTCGAGAGCCAGTGCCAGGCGTTTCTCGCCTGGGCCGAGCAGGAAC
|
|
Amino Acid Sequence |
>hypothetical protein
MHEQYQAPLPVNSPALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWV DAQPTLELAQLFGLLKKDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRY ESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLER GERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLKEPGCAVHYVENGLINSLFGLLCWE AIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPG NRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|