Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAAACAACAGAGCAGCCAGCAGATGACCCGCGGCTTCGAACCCTATCAGGAAACCAAGGGCGAGGAGTACATGAGCGAGCGCATGCGCGCGCACTTCACC GCGATCCTGAACAAATGGAAACAGGAGCTGATGGAAGAGGTCGACCGTACCGTGCATCACATGCAGGACGAAGCGGCCAACTTCCCCGATCCGGCCGACC GCGCCAGCCAGGAAGAAGAATTCAGCCTGGAACTGCGCGCCCGCGACCGCGAGCGCAAGCTGATCAAGAAGATCGACGAGACCCTGCAACTGATCGAAGA CGAAGAGTACGGCTGGTGCGACTCCTGCGGCGTCGAGATCGGCATCCGTCGCCTGGAGGCGCGCCCCACCGCGACCCTCTGCATCGACTGCAAGACCCTC GCGGAAATCCGCGAGAAGCAACTCGGCTCCTGAGCCGGACCGACGGGGCGCCAAGGCGCCCCGTTTCGTTTCCGCCGTTCCCCGCCGCACCGCCCGCGCC
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DNA Sequence for Gene |
>NR93_RS03765
ATGACCTCTTCCTATGTAGGCCGCTTCGCCCCGACGCCCAGCGGCTACCTGCACTTCGGTTCCCTGGTGGCGGCCGTCGCCTCCTACCTGGACGCGCGTG CCGTCGGCGGCCGCTGGCTGGTGCGCATGGAGGACCTCGACCCGCCCCGCGAAGTCCCGGGCGCCCAGCAGGCGATCCTGGAAACCCTGGAGCGCTACGG CTTCGAATGGGACGGCGCGGTGGAGCGGCAGAGCGAACGCTTCCCGGCCTACGCCGCAGTGGTCGAGCAACTGCTGCGCAGCGGCCTGGCCTACGCCTGC ACTTGCTCGCGCAAGCAGCTTGAGGGATTCGCCGGGATCTACCCGGGCTTCTGCCGCGACGCCGGGCACGCCCGCGAGGATGCGGCGATCCGCCTGCGCG TGCCGGAGCTGGAATATCGCTTCGTCGACCGCGTGCAGGGCGAAGTCCGCCAGCATCTCGGCCGCGAGGTCGGCGATTTCGTCATCCAGCGCCGCGACGG TCTCTACGCCTACCAACTGGCGGTGGTGCTGGACGACGCCTGGCAGGGCATCACCGACATCGTCCGCGGCGCCGACCTGCTCGACTCGACCCCGCGCCAG CTTTACCTCCAGGAATTGCTGGGGTTGAGCCAGCCGCGCTACCTGCACGTGCCGCTGATCGTCCAGCCGGACGGGCACAAGCTCGGCAAGTCCTACCGTT CCCCGCCACTGCCCGCCGAGCAGGCCGCCGCGCCGCTGACCCGCGCCCTGCGCGCGCTCGGCCAGCGGCCGCCGGCCGAACTGGCCCAGGCCAGCGCCAG CGAGGCGCTGGCCTGGGGCGTCGCGCACTGGGACGCCACGCGCATCCCGCGCTGCGCTACCCTTCCCGAGGAACGCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCCCGGCGGCTTGCCGGCACCCACCTGCAGCCTGTAGCCTGCCGGCCCAAGCATGAGGGAAGCGGCATGTACATCTACCGACTGGTCCTGCTCCTGG TCGTGGGCATCTATCTCTTTTCCCCCGCCATCATGGACTGGTGGATCGACCCCAACGGCGCCTGGTACCGCCCGTACCTGCTGTGGCTGATCCTCATCGT GGTCACTTTCATCCTGCAGAGCCAGCGCGATGCTGACGAGCTTTAGCCTGACCCAGCTGATCCTGATCAGCGTCGCCTACCTCTCCACCCTCTTCGGCAT CGCCTGGATCACCGAGCGCGGCTACGTGCCGCGCCGGCTGGTACGCCACCCGCTGGTCTACACCCTGTCGCTGGGCGTCTACGCCAGTGCCTGGGCGTTC TACGGCACGGTAGGCCTGGCCTACCAGTACGGCTACGGGTTCCTCGCCATCTACCTGGGGATTTCCGGGGCCTTCCTGCTCGCCCCGGTGCTGCTCTATC
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Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTSSYVGRFAPTPSGYLHFGSLVAAVASYLDARAVGGRWLVRMEDLDPPREVPGAQQAILETLERYGFEWDGAVERQSERFPAYAAVVEQLLRSGLAYAC TCSRKQLEGFAGIYPGFCRDAGHAREDAAIRLRVPELEYRFVDRVQGEVRQHLGREVGDFVIQRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQ LYLQELLGLSQPRYLHVPLIVQPDGHKLGKSYRSPPLPAEQAAAPLTRALRALGQRPPAELAQASASEALAWGVAHWDATRIPRCATLPEERL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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