Pseudomonas aeruginosa AZPAE14882, NR98_RS18615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14882 AZPAE14882_contig_27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGTGGCGGAAGCGGCTCAGGCGCGGTAGCAGCCAGCGCAGGGTAAGGGTGGAAGGCGCCTTCAGGCGCAGGGTGGCGTCGTCCACACGCAGGGCGGT GCAGGCCCGTTCCAGCGCATCGAAGCCGTCGCGCAGCCCGGGCAGTAGCAGGCGTGCCGGCTCGGTCAGCTGCAACTGGCGGCCATGGCGCTCGAACAGA CGACAACCGAAGTGCTCTTCCAGGGTACGGATGTGCCGGCTCACCGCGCTCTGGGTTATCGCCAGTTCCTCGCCGGCGCGGGTGAAAGAGGCGTGCCGGG CGGCAGCCTCGAAGGCGCGCAGGGCATACAGCGGGGGCAGGCGACGGGTCATTGGGGAATTACCTCTTTCATGACTTTTACTCATGCCTGGCATCTTGTT TTTCCTTTTGTGGAGCCATGCCAGTCGCACCGAGAATAGCCGCATTCTCAACGCCGACAGGCCATCGCGGCAACCATCTCCTCCTGAGCCTTACTCATCC
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| DNA Sequence for Gene |
>NR98_RS18615
ATGTCCTCGCCATCCCTCGTCGAACTCAAAGCCATCCTGCGCCTGGCGGGCCCGTTGATCGCCGCCCAGCTGGCCTATGTCGCCATGGTCTTCACCGACA CCGTGATGATGGGCAAGCTCGGCCCCGACGCGCTGGCCGCCGGCGGCCTGGGCGCGGTCAGCTACGCCTTCGTCTCGACGTTCTGTGTCGGCGTGGTGGC AGCGGTCGGCAACCTGGTGGCGATCCGTCACGGCTGCGACGACGCCGCTGGCGCCGCCGCGGCCGCTCGCTCCGGACTCTGGGTCGGCGCCGCGCTGGCC CTGGCCGCCGGCCTGCTGCTATGGAACCTGCGGCCGCTGCTCCTGGTCTTCGGCCAGGCGCCGCAGACGGTGGACGGCGCCATGCAGTTCCTCCACAGCC TGACATTCGCCCTGCCCGGCTACATGGCCTTCATGGTCCTGCGCGGCTTCACCAGCGCCATCGACCGCGCCGGCCCGGTGATGGCGATCAGCGTGCTCGG CGCGCTGGCCAACCTGGCTCTCAACTATTCCTTCATAGAAGGCCTGTTCGGCCTGCCGCGCCTGGGCCTGGCCGGTATCGGCCTGGTCACCGCCCTCGTC ATGAACTGCATGCCGCTGCTGCTGGCCCTGTATATCCGCCTGCAGCCGGCCTATGCCGAGTACTCGCTGCTGCGCGGACTGGGACGGCCGCAGCGGGCGA TGGTCGAGGAGATACTGCGCCTGGGGCTGCCCATCGGTGGCACCTACGCGGTGGAGTCGGGGATGTTCACGGTCGCCACCCTGTGCATGGGCATCATCGG CGATCACGCCCTGGCCGCGCACCAGATCGCCATCCAGGCGGTATACGTGGCGTTCATGGTGCCGGTGGGGTTGTCGTACGCCACCACCTACCGCATCGGC CAGCATTTCGGCGCCGGCCGCCTGCTCGAAGCACGCCGCGCCGGGCGTGTCGGCATCGGCTTCGGCGCGCTGTGCATGCTGCTCTTCGCCGGGCTCTTCT GGTGGATGCCGGAGGCCATCATCGGCCTGTTCCTCGACCGCGACGCCCCGGCCAACCGGGAGGTGGCCGCGATGGCCGTCTCGCTGCTGGCGATCGCCGC CTGGTTCGAGCTGTTCGACGGCACCCAGAACGTCGCCATGGGCGCGATCCGCGGTCTCAAGGACGCCCGCACCACCTTCCTGGTCGGCCTGGCCTGCTAC TGGCTGGTCGGCGTGCCGCTGGCCTGCCTGCTGGCGTTCGCGGCCGGCTGGGGCGCCGCGGGCGTCTGGTGGGGGCTGGCCGGCGGCCTGGCCTGCGCGG CCATTGGCCTGACCCTGGCCTTCGAGTGGAAGACCGCGCGGTTGCTGCCGAAAGCCACGGCCAGCGAGGCGTCGGCGCTCAATTGCCGAGCGGCTGGCCG CGGTGCGCCGAGCGCTCGCCGATGCCCAGGAAACGCGCCAGTTCCGCCAACGGCAGCGGCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGTAGCCCTGCACCTGGTCGCAACCGAAATCGCGCAACTGCTCCTGCTGGCGCAGGGTCTCCACGCCTTCGGCAACCACTTCCAGGTTGAGGTTGTG CGCCAGGTTGATCATCGCCCGCACCAGTTGGAAGTTTTCCGCCCGCTGGTCCATGCCGCCGACGAAGCTGCGGTCGATCTTCAACAGGGTGATCGGCAGG CTATTGAGGTGGACGAAGGACGAGAAACCGGTGCCGAAGTCGTCCAGCGAAAAGCGCACGCCCAGTTGGCCGAGCGCCTGCATGGTCTGCAGCACCTGGT CGCTGCGCCGCATCACGGCGGTCTCGGTCAGTTCGAACTCGAGCCAGCGCGCGTCGACGCCGTGCTCTTCGATCAACCGTTGCAGGGTCGGCAGCAACTG GCTGTCCTGGAACTGGCGGAACGACAGGTTCACCGCCATGTGCAACGGCTCCAGACCGCGCCCGTTGAGCCACTGCATGTCGCGCAGGGCGCGGGCGATG
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| Amino Acid Sequence |
>multidrug transporter
MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVSTFCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWVGAALA LAAGLLLWNLRPLLLVFGQAPQTVDGAMQFLHSLTFALPGYMAFMVLRGFTSAIDRAGPVMAISVLGALANLALNYSFIEGLFGLPRLGLAGIGLVTALV MNCMPLLLALYIRLQPAYAEYSLLRGLGRPQRAMVEEILRLGLPIGGTYAVESGMFTVATLCMGIIGDHALAAHQIAIQAVYVAFMVPVGLSYATTYRIG QHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFWWMPEAIIGLFLDRDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTTFLVGLACY WLVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLPKATASEASALNCRAAGRGAPSARRCPGNAPVPPTAAAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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