Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_33, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NS61_RS25870
CGTCGACTTCGACAACCAGGGCGGCGGCCTCTACGCCAGCGGCCTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGTCAGGGC GGCAAGGTCGGCGCCGGGCGCATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCG CCGCGATCGACAACAGCGGCGGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGTTGGTCGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGA AAGCGCCAACCAGGACCTCGACCTGCAACTGGGCAGCCTGGCCAACGCCGGCGGGCGCATCCTCCACACCGGCAATGGCACCTTCGGCCTGGATTCCGCG CAGGTGATCCGCGCCGGCGGGGAACTGACCACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGA ACCTGGACATCGGCACCTTCCGCCAGACGGCCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCT GGCCAGCGACGGCAGCTTGCGCCTCGAGCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTC GACCTCGGCAATGCCGCCAGCCTCGCCGGCGGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACC TCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCT GTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCG GGGGGCTGGGCAAATCGCTTGGAGAACATTTCCGGGAATTTAGAGAGCACAGGTGATATGCGTTTCTCCGTGAGTTCACTTCTCAATAGAAGGGAAACCC TAGAGATTGAAGGTGACTTGCAGAATAGCGCTATTGGCGTCCGCTGTACGGGGTGTCAGCTTTCTGAGAGGTGGGGAAAAACTAGGTCTTCGAGCGAGCT TGTCTGGATCAGGGAATATAAGTCTACATTGGGAGAGTCTTCTGCCGCTGCTTCAATTACGGCTGGTCGAGATCTGCTTGTTGTAGGTGCAAGCCTGCAG AATATTGCTTCTAATATAAGTGCTGTAAGAGACGCCACGCTATCTCTGAGTAATTTCGAAAACAAAGGTTATGCGTTAGGGGAATATGCGGTCAGGGGCG TTTATTCGCCGCCGAGTAAATTTGGCGAAGAATTGCTTATGCGCATATTGGCGTATAACGCTGTCAACGATCCCAGTTATGGGGAGGGATATGCGAGCAC AGGGGGGAGACTTCCGAATATTCATTATTTCGACAAGAATTTTAATGAAAAAGTCTCTCCGCTGGAGGTCATTCATGGAAACGGGAAAAATGGTGGGCCG GGTTGGCACCTGTACTTCGGTACCTTAGATGTTGAGTATCCGGGCACAGATCGCTGGAATAAGGCTATTGGACGAATACCGGCGCCGAATTATTCATCGA AAAAAACGGATGCTATTCCAGATCTACTTAAGGGATTGGCTCCTCTCGATGAGTTGACGATTAACAAAGGGGCGAACTCAACGGTTGGTGCTGTCGTGCA AGCTGGCGGTCGTGTAACGGTGAATGCTGCGGAGAGTTTCAATAACTCTGTCCTACAGGGATTTCAGGCCGTTCAGGAAACCCAGTTACCTCATCAGGAC ATAGCTGTTTCAAGCACGACGAGCGCCGTAGTGACTCTGAAGAGTCAACTGCCAGCGGATTTGGCAAGGCAACAGATCAATCCTCTCACCCTACCGGGCT TCAGCCTGCCTCAAGGCCAGAATGGGCTCTTCCGCCTGGCGTCTCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCTGAAATCCGCCAGCGATCTCAC CCAGAGCGGCCATGGCGTATCTGTATCCGCACAGGCAGGCAGTGACGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTCGGCGATGATCGTGTCACCTCG CTTGCCGGTTCCGCCTATCAAGGCCGGGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTTCC AGGCCGGTGAGCACCAGGCGACCACGGGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGCGTCATCCTCGCCGATCTGCGCGG TGGTCTACCCTCGTTCTCAAGCCTTCCCGCGGCTGATCGTATTCAAAGCACAGTGCCCGGTCACGATGGGAATGGAACTATTCTCGCCAATTGGCAGGGT CCGCAGGCGACGGTCCAGGCCTCGCCTTCGACAGTGCGTGTAGAGGGGGTAGTTTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGATCTGCCGGCTG AGCAGTCGTCGGTGCAGGCACTGCCTTCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCGTTCTTGCCGAGCCTCCGGTTGG GCAGCCAGCGTTGCAAACCCTGCCGTCGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCAAC CCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGATGACAGCAAGAAGCGCCTGGGCGACGGTC TATACGAGCAGCGCCTGGTACGCGAAGCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTGAT GGACAACGCCATCGCCAGCAAGGACGTATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCCGCGCTGACCCACGACATCGTTTGGCTG GAAGAAGTCGAGGTGAATGGCGAGAAGGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGGGC GCGACGTGAACCTGATCACCGGCGGGGACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGCGG CCTGATCGAGGCCGGCAACCGCCTCGACCTGCTGGCCAGCGGCTCCATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCGCC CTTACCGGAGACGTTATCAATGAACGGACGGTGACCCAGCACCAGTCCTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCGTA TCGAGGCTGCGCAGAAGCTGACCGTTTCGGCAGGTCGCGATGTAACCAATATTGGCGGTGTCATCGACAGCAAGGGCGACCTCGCCTTGCAAGGCGGCAG GGATGTCCTGGTTTCGGCTGCGGTAGCGGAGCGGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAAGTCGTGGCG GGGCGCGATATCAGCGTCAGCGCCGGACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGTGG GCCTGGTCGCGGCTGCCAACGAAGAGCATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGACGC TGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGGCTGGTCGCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGCTG GAGCTGCTGGCCGCCAACGACAGCAGTTACTACCTCTACGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGATG TGACGGCAGTGGGCAGCCAAATATCCAGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACTTACCAGGGCGCGAAGCTGGAATCGGGCAACGA CCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGACGCGGTGAAGGACCTGCACCAGGAGAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCG TCGAAGGGCAAGGGCCAGACCGACGAAACCGTACGCCAGAGCCAGCTCGTCGCCCAGGGCAACCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACC TCAAGCACATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGTGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGA TGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGGTTAGGGGCTGCGCCGTCACTGGCCATTGCCATCGTTGCAGTT GCTTACCTCGGCCCGGTGTATGGCGCAATGGCCAGCAACCTCGCCATTGGCACCATCAACAATGGCGGTGACCTTGGCAAGGGGCTGCAACAGGCCACCA GTGCTGACAGTCTGAAAGGGTACGCCATCGCAGCGGCCACGGCTTATCTCGTCAGCCCGCAGTTGGACAAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTTTCGGCGTATCCAGTGACAACATCAACAAAGTCACCAAAGGATTCAAGCTCAG
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Amino Acid Sequence |
>hypothetical protein
VDFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVLE SANQDLDLQLGSLANAGGRILHTGNGTFGLDSAQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLL ASDGSLRLELSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLL FSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGGWANRLENISGNLESTGDMRFSVSSLLNRRETLEIEGDLQNSAIGVRCTGCQLSERWGKTRSSSEL VWIREYKSTLGESSAAASITAGRDLLVVGASLQNIASNISAVRDATLSLSNFENKGYALGEYAVRGVYSPPSKFGEELLMRILAYNAVNDPSYGEGYAST GGRLPNIHYFDKNFNEKVSPLEVIHGNGKNGGPGWHLYFGTLDVEYPGTDRWNKAIGRIPAPNYSSKKTDAIPDLLKGLAPLDELTINKGANSTVGAVVQ AGGRVTVNAAESFNNSVLQGFQAVQETQLPHQDIAVSSTTSAVVTLKSQLPADLARQQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLT QSGHGVSVSAQAGSDASGWSTQARRVGDDRVTSLAGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRG GLPSFSSLPAADRIQSTVPGHDGNGTILANWQGPQATVQASPSTVRVEGVVSSPGGNGSILADLPAEQSSVQALPSAVRAQGSLPRLEERSAVLAEPPVG QPALQTLPSVARVEGVPSNATPSNSHKYLIETNPALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLM DNAIASKDVLGLTPGVTLSAAQVAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSG LIEAGNRLDLLASGSIRNDQGGIIAGREVSLSALTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVTNIGGVIDSKGDLALQGGR DVLVSAAVAERGWTAGSQAYQTQTTQMGAEVVAGRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDA GGDLAINAGQDLRLVASQASAGDEAYLVAGDKLELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGND LAIVSGGAVTFDAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQVDPQLAWLKEAEQRGD VDWRMVQEVHDSWKYSNSGLGAAPSLAIAIVAVAYLGPVYGAMASNLAIGTINNGGDLGKGLQQATSADSLKGYAIAAATAYLVSPQLDK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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