Pseudomonas aeruginosa AZPAE14945, NS61_RS25865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
DNA Sequence for Gene
>NS61_RS25865
CGTCGACTTCGACAACCAGGGTGGCGGCCTCTACGCCAGCGGCCTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGCCAGGGC GGCAAGGTCGGCGCCGGGCGCATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAGAGCGAGCTGCACCTGCGCGCCG CCGCGATCGACAACAGCGGCGGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGCTGGTCGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGA AAGCGCCAACCAGGACCTCGACCTGCAACTGGGCAGCCTGGCCAACGCCGGCGGGCGCATCCTCCATACCGGCAACGGCACCTTCGGCCTGGATTCCGGG CAGGTGATCCGCGCCGGCGGCGAACTGACCACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGA ACCTGGACATCGGCACCTTCCGCCAGACGGCCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCT GGCCAGCGACGGCAGCTTCCGCCTCGACCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTC GACCTCGGCAATGCCGCCAGCCTCGCCGGCGGCGCCAATGTCACGCTTGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACC TCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGATTGCT GTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCC GGCAACCGTGCCGCCAGCCTGCGCAACCTTTCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGC TGGAAAGCAAGTCGGGCCTGTACACCGCGAAGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTG GACCATCACCCAGCGCGACAAGACCGAGGTCACCGCCAGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAAC AACCTTTCCAGTCTGATCGGCAGCGGCGGCAACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCG TGCTGCGTACCGCTCGCGGCGGCGATATCGGCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGC GCGCGCGGGCGAGATCCCCGCCGCGCTCAACGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGC GACCAGTCCTACGCAGCGGTGATCCAGGCCGCCGGCGATGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCG TCGGCAGCGGCCGCCAGGTGGGCGACAGCGCGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCG CCAGGTCAACCCGGTTACCCTGCCCGGCTTCAGCCTGCCCCAGGGTGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAATGGCAGC GCCGCGCTCGGTGCCGGCGCCGACCGCACCCAGGGCGGTAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGCCGCCGGTACCTGGCAGGGCCAGG GCGTGCGAGTCGACGGCCTGGCTGGCGCGGCCAACGTCCAGGGTCAGGGCGGCAGCACGCTCGGCGGTAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGT GCCCGGCAACGCCACGCCGAGCGCCAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCTCAACTCGGACTACTTGCTC AGCGGCCTGGGCATGAACCCGGACGCTAGCAAGAAGCGTCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCC AGCGCTACATCGACGGGCTGAGCAGCGACGAGGCGCTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACAAGCTCCAGCTGCAACTGGGCGT GGGTTTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCAGTGGTCTAC CTGGCCCAGGCGGAGGGTCGGCTGGCACCCAACGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCC TGCGCGCGCGGAACGACCTCTCGGCGACGGCCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGAT CCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGCGACGTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGC GCGCTCGACGGCCGCACCTGGGAACGCAGCTTCGCCGACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCA ACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAGCCTCGACGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTG GAGCACGTCGCGGCTACAGAGCGTGACCCAGCTCGGCGCCGAAGTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCC AGCGCCCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGA AGGTCACCTACCAGGAAGACAAGGTCGCCCAGCAAGGCACCCGCGTGGATGCCGGGGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGC GAGCCAGGCCAGCGCCGGCGACGAGGCCTACCTGGTGGCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAG AAGAAAGGCGACTTCGGCCGCAAGGAAACCCGGCGCGACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGC TCAGCGGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGA TCTGCACCAGGAAAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATC GTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTAAGCCAGACCATCGACGCGATGG TGCAGGCGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAG CAACTCGGGGTTGGGGGCTGCGCCGTCACTGGCCATTGCCATCGTTGCAGCTGCTTACCTCGGCCCGGTGTATGGCGCAATGGCCAGCAACCTCGCCATT GGCACCATCAACAATGGCGGTGACCTTGGCAAGGGGCTGCAACAGGCCACCAGCGCTGACAGTCTGAAAGGGTACGCCATCGCAGCGGCCACGGCTTATC TCGTCAGCCCGCAGTTGGACAAGGCATTCGGCGTATCCAGTGACAACATCAACAAAGTCACCAAAGGATTCAAGCTCAGTACAGTTGAGGGAATCGGTGG ATTTGCTGCCTACAGCATTGCCCAAGGCTTTGCTCAATCGGTCATGCAGCAGGCCGCCTATGGCGGCAGCTACATCGACAACCTCGGTAATGCCATGGCA GGTCAGGCGCGCAACCTGGGAATGGCGGTAGGTTTCAATTTCATTGGCGACTCGGTCAAATACCCTGATGGCAGCCCGCCGAAAATCATGGCTCACGCCC TGATGGGAGGTCTGCTGGCCGAAGCCTCCGGCAGTGACTTCAAGACTGGAGCGGCGGCCGCTGGTGCCAACGAGGCCATGATCAACCTCCTTGGGAAAAT GGTAGGTGGCGATCAAAACCTCGAACTGATGGCCTCGCAACTCGTTGGCGTAGCCGCGGCAAGTGCGGTCAATGGCGATGTGAGTCTGGGCGCCGAGATC GCCAAAAGCGGGACGGCGTACAAC
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCAGCTACACCCAGATGAAATCAAATTCGCATCGGATGTGAAGCGCGTCAAACGTTATGCCCAGGAAAATGGGCTGAGCGAGGACACTGCCCGCAAAG AGCTTCTCAGCACGGCCGCCATGATGGTGGACAATGGCTGGAACCAGGCCTTGGCCGGCACAGACATCAACGCTGCCCGGGCTGCTCAGTATCTGCGTAC GGAGCTGGGCACAGGCCCGGACAGTAATCTCTTCCAGGTGACCCAGGCTGACTACTACAACGAGCGGGTGGGGCTGACGGCGCTATTCAAGAACAAGGAG GCCCTGACCAGCGTTCTGGAAAACATAGCCCTAGCGAATCCCGCGAGCTATACGAGGGACCCCGCGAACCGTGCGGAAGTGCTGAATGCCAAAGGTGAAG GTAGCCAAGCGGGCTTTGGGCTGGCACTGGAAGGGATCGTCAGCGCGCCTTCAAAAACTGCCTTGTGGTTGATGGGTGCGCTAACCTGTTCAAGCTGTGC
Amino Acid Sequence
>hemagglutinin
VDFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVLE SANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLL ASDGSFRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLL FSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIW TITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPA RAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARR QVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNAAGTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGV PGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDASKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGV GLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSI RNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRW STSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIA SQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKD LHQESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYS NSGLGAAPSLAIAIVAAAYLGPVYGAMASNLAIGTINNGGDLGKGLQQATSADSLKGYAIAAATAYLVSPQLDKAFGVSSDNINKVTKGFKLSTVEGIGG FAAYSIAQGFAQSVMQQAAYGGSYIDNLGNAMAGQARNLGMAVGFNFIGDSVKYPDGSPPKIMAHALMGGLLAEASGSDFKTGAAAAGANEAMINLLGKM VGGDQNLELMASQLVGVAAASAVNGDVSLGAEIAKSGTAYN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site