Pseudomonas poae RE_1-1-14, H045_21165 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCCGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTACGGTCTTGAGCGCCTGGCCATGTACCTGCAAGGCGTGGATTCGGTCTACG ACCTGGTGTGGGCTGACGGCCCGTTCGGCAAGGTCACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAATCCACTTACAACTTCGAACACGCCAA CGTCGACAAGCTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTATGAAATGGTG TTGAAGGCGTCCCATACCTTCAACCTGCTGGACGCCCGCCGTGCCATCTCGGTGACCGCGCGCCAGCAATACATCCTGCGTGTGCGCACCCTGGCGCGTT CCGTCGCCCAAGCCTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATGGCAACCCCGGACCTGCGTGATGAAGTGTTGGCTAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>H045_21165
|glyS
ATGAGTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCCAAGGCACTCAATACCCTGGCCGACGCGTTCCTGGCCGGTATCGAAAAAG GCCTGCAAAGCGCCGGCCTGAAATTTGAAGCGAAGAAGGTCTACGCCGCGCCGCGCCGTCTGGCCGTGTTGCTGACCGCGCTGGAAACCCAGCAGCCGGA CCGCAGCATCAACCTCGACGGCCCGCCGCGTCAGGCCGCTTTCGATGCTGAAGGCAATCCGACTCAAGCCGCCCTCGGCTTCGCCAAGAAGTGTGGCGTC GAGCTCAGCGAGATCGACCAGAGCGGCCCGAAACTGCGGTTCAGCCAGGTGATCACCGGCAAGCCGACCGCCAGCCTGTTGCCGACCATCGTTGAAGACT CCTTGAATGACCTGCCGATTCCCAAGCGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTGCGCCCAACCCAGTGGCTGGTGATGTTGCTCGGTGATCA AGTGATCGACTGCACCATCCTCGCCCAGCAAGCCGGGCGCGATTCCCGTGGTCACCGTTTCCACCACCCGCAAGCTGTACGCATCACTTCGCCGGCCAAC TACGCTGCCGACTTGCGCGCCGCTTACGTGCTGGCCGATGCCAATGAGCGTCGCGAGCTGATCAGCAAGCGCACCGAGGAGCTGGCCCGTCTGCAGGAAG GCACCGCCATCGTGCCGCCAGGCCTGCTCGACGAAGTGACCGCGCTGGTGGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAACGTTTCCTCGATGT GCCACAGGAAGCGCTGATCACCACCATGCAGGACAACCAGAAGTATTTCTGCCTGCTGGATGCGGACGGCAAGTTGCTGCCGCGCTTTATCACCGTGGCT AACATCGAAAGCACCGACCCGCAGCAGATCATCGCCGGCAACGAGAAAGTCGTTCGCCCGCGCCTGACCGACGCCGAATTCTTCTTCAAGCAAGACAAGA AGCAGAAGCTCGAAGATTTCAACCTGCGCCTGCAGAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAAGCCGTGCGCGTCTCCAAGCTGGC GGCCTACATTGCCCAGCGCATTGGTGGCGATGCAGCCTGGTCGACACGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAGTTC CCCGAGATGCAAGGCGTGGCGGGCTACTACTACGCCCTTAACGACGGCGAACCCAACGATGTGGCGCTGGCGCTGAACGAGCAGTACATGCCGCGCGGCG CTGGCGCCGAGCTGCCGACCACCCTCACCGGTGCGGCCGTGGCCATCGCCGACAAGCTGGACACGCTCGTCGGCATCTTCGGCATCGGCATGCTGCCCAC CGGCAGCAAAGACCCGTATGCCCTGCGCCGTGCAGCCTTGGGCGTGCTGCGTATCCTGATCGACAAGAAGCTGGACCTCGACCTCGCCCAAGCCGTGGTG TTCGCGGTCGGCCAGTTCGGTGCCAAGGTCAAGCAGGCTGGCTTGGCTGAGCAAGTGCTGGAGTTCGTCTTCGACCGCCTGCGCGCGCGTTACGAAGACG AAGGCGTGGACGTCTCCGTGTACCTGTCCGTACGTGCCCTGCAGCCTGGTTCGGCGCTGGACTTCGATCAGCGTGTGCAAGCCGTGCAGGCCTTCCGCAA GTTGCCGGAAGCCAATGCCTTGGCTGCCGTGAACAAGCGGGTGTCCAACCTGCTGGGCAAGGCCGACACCCTCGGCACCGCCGACGTCGACCCGGGCCTG TTTGCCGATGCCAAGGAGTTCTCGCTGAACTCGGCTATCGCCAAGGCAGAAAACGCAGTGAAGCCGCTGATCGCCGAACGCAACTACGCCGAAGCCCTGG CGCGCCTGGCCACCCTGCGTGAGCCGGTGGATGCGTTCTTCGAAGCGGTGATGATTAATGCCGAAGATGCTGGCGTGCGGAAAAACCGCTACGCCATGCT GGCGCGTCTGCGCGGCCTGTTCGTCAACATCGCTGACATTTCGACGCTGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCATGTTGAAACTGCTGATTCTCGATCGGGACGGGGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGCGGAATGGATACCACTGCCCGGGTC GATCGAGGCCATCGCGCAGTTGAGCAAAGCCGGCTGGACAGTGGCAATTGCCACCAACCAGTCCGGCATCGCCCGCGGCTATTACAGCATCGCTACCCTG GACGCCATGCACGCGCGCTTGCGCACGCTGGTGGCCGAGCAGGGCGGTGACGTGGGGCTGGTGGTGTACTGCCCTCACGGGCCGGATGAGGACTGCGATT GCCGTAAGCCCAAGCCTGGCATGTTGAAAATCATTGCAGAACATTACAAGGTACCGTTGGCTGGGATATGGTTCGTCGGGGACAGTCTCGGTGACCTGGA GGCGGCCAAGGCCGTCGACTCTCAGCCAGTTTTGGTCAAGACCGGAAAAGGCGAAAAGACCCAGGCGAAAAACCTGCCGGTGGGCACCTTGATTTTTGAC
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| Amino Acid Sequence |
>glycyl-tRNA ligase subunit beta
MSAQDFLVELGTEELPPKALNTLADAFLAGIEKGLQSAGLKFEAKKVYAAPRRLAVLLTALETQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV ELSEIDQSGPKLRFSQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQVIDCTILAQQAGRDSRGHRFHHPQAVRITSPAN YAADLRAAYVLADANERRELISKRTEELARLQEGTAIVPPGLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESTDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAVRVSKLAAYIAQRIGGDAAWSTRAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPNDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLAQAVV FAVGQFGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPGSALDFDQRVQAVQAFRKLPEANALAAVNKRVSNLLGKADTLGTADVDPGL FADAKEFSLNSAIAKAENAVKPLIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRGLFVNIADISTLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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