Pseudomonas aeruginosa AZPAE14988, NT03_RS19940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCATAACGTTTTTTCCGGGCAAGGCGCCTCGACGCTTGCCGCTCGCGTGAGCGAGCCGGTGGGCGGCGGACGACTGGCAGTTCCCGGGAAGACTCGGCC GCCGTCCTCACGAAAAACCAAAAACCCTTCATTTAGCCGAAGAAGCCGGCAGATGGACTCATTTTTTCGAAAAAAGGCGATCGCCAGAATGTCCCAGAAC TCCCTGCTCGACCTGTATGCGCACCCAACGGTGGTGGCCCGCTTCAGCGAAATGGCAGCGCTTCATCCCCATCGCGAAGCCATCAGGGACCGTTTCGGAA GTGTCGACTATCGGCAACTCTTGCATAGCGCCGAACAACTTTCAGACTATCTTCTCGAGCATTATCCGCAGCCGGGAGTTTGTCTTGGAGTGTACGGCGA ATATTCTCGGGAAAGCATTGTCTGCCTGCTCGCCATACTATTATCCGGCCATCACTACTTATATATAGACCTGAAACAACCGGCGGCCTGGAATGCAGAG
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| DNA Sequence for Gene |
>NT03_RS19940
TTGTGCCGGCAGGTCGACTGCCGCCTGATCCTCGACTGCTCGACCACGCCGACGCCCGCCAACGGTCTTCCCTGCGTCCCGGTCAGGCACCTGCCTGCCG CTCCAGCCTCGGTCGCCCGGCCATGCTTCGCGGCGGACCAGATCGCCTACATCAACTTCTCCTCGGGCACCACCGGCCGCCCGAAAGCCATCGCCTGCAC CCACGCCGGCATTACCCGTCTGTGCCTGGGCCAGTCGTTCCTCGCGTTCGCTCCGCAGATGCGCTTCCTGGTCAACTCGCCGCTGTCCTTCGATGCGGCG ACCCTGGAGATCTGGGGCGCGCTGCTCAACGGCGGCTGCTGCGTGCTGAACGACCTCGGCCCCCTCGACCCGGGCGTGCTGCGCCGGCTGATCGACGAGC GCGGAGCCGACAGCGCCTGGCTCACCGCCTCGCTGTTCAACACCCTGGTGGACCTCGACCCGGACTGCCTCGGCGGCCTTCGCCAGTTGCTCACCGGCGG CGACATCCTCTCGGTGCCGCACGTGCGCCGGGCGCTGCTGCGGCATCCGCGACTGCACCTGGTGAATGGCTACGGACCGACGGAGAACACCACCTTCACC TGCTGCCATGTCGTCACCAACGACGACCTCGAGGAAGACGACATCCCCATCGGCAAGGCCATCGCCGGCACCGCGGTGCTCCTGCTCGACGAGCACGGAC AGGAGATCGCCGAGCCCGACCGGGCCGGGGAGATCGTCGCCTTCGGCGCCGGCCTGGCGCGGGGTTATCGGAACGATGCGACGCGCACCCGCGCCAGCTT CGTCGAGTTGCCCTATCGCGGCCGCCTGCTGCGTGCCTACCGTACCGGCGACCGCGCTCGCTACGACGAGCAGGGTCGGCTGCGCTTCATCGGCCGCGGC GATGGTCAGGTCAAGCTGAACGGCTATCGCCTCGACCTCCCCGCCCTGGAACAGCGCTTGCGCCGCCAGCCGGGCATCCTCGACTGCGCCCTGCTGGTCC GCGAGCGCAACGGCGTCAAGCAACTGCTCTGCGCCTGGACGGGAAAAGCCGACGCCAGCCCGCAAGCCCTGCTCCGCCAACTGCCCACCTGGCAGCGCCC GCATGCCTGCGTCCGGGTCGAGGCCTTGCCCTTGACGGCGCACGGCAAGCTGGACCGCGCCGCCCTGCTGCGCCGCCTGGAAGAACCGCTGGAGCGCTGC GCCAGCGCGCTCGATCCCGACCAACGCGGCTGCGCGCAGCTGTGGAGCGAATTGCTGGGTTGCGAGGTCGGCGCCGCCGACCAGGATTTCTTCCTCTGCG GCGGCAACTCGTTGCTTGCCCTGCAACTGGTCGCCCTCTGTCAATCGGCGGGTGCGGGAGCAAACCTGGGACTCGCCGACTTGCAGGCAAACTCGCGCCT CGACCAGTTCAGCCGTCTCCTGCGCAGCCACGGCCTGGCGCCGGAGCGTCTGCTGGAACGGGCGGCGACGCCGGAGCAGCCGCTGGTGCTGTCGAGGAGC GCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGTCGGTCTCTCCGCGGAGGTGCGCTACCACTGGTTCCGCGAGCACCTGGTGGTGGTCGGCGATTGGCACCGCCTGTCCCCCTCCGAGCGCGACCGCCT GCGGCACCAACCGATGCCGGATGAGGCCGCGCAGTCCTTGCGCGTCGACCTGTCGCCCTGGTCCTGCGGGATGGTCTTCAGCGAGCTGCTCGGCGCCGAC CTGACTCGCTTCGGCCTCTGCTACCTGGCTCCGGCCGAGGTGCCGGCATCCGACCTGACGCGCCTGGGACGGCGCCTGCGCGAAGAGTTCCCGTTGCTCG ACAGCCAGGTGGACAGCGGCGCGGAAGGTTTCGAACTGGTCGTCCACGGGCGGCCCGAGGAGAGCCCGGCGCTGGAAGTCGGCCCCTTCGCCGACGAAGA CGCGCTCATCGCAGCGCTGCTGCAACGCCCGCATTCCCTGTTCGAGCGCGGCCTGCTGCGACTGTTCCACGGGCGCTGCGGAGGACGTGTGCGCTGGGGT
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| Amino Acid Sequence |
>hypothetical protein
MCRQVDCRLILDCSTTPTPANGLPCVPVRHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLGQSFLAFAPQMRFLVNSPLSFDAA TLEIWGALLNGGCCVLNDLGPLDPGVLRRLIDERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFT CCHVVTNDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLARGYRNDATRTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRG DGQVKLNGYRLDLPALEQRLRRQPGILDCALLVRERNGVKQLLCAWTGKADASPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAALLRRLEEPLERC ASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHGLAPERLLERAATPEQPLVLSRS AA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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