Pseudomonas protegens Pf-5, PFL_5552 (ssb)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TCGGCGATAGCCTGCGGGCGCTGGTGATTGGTACCGTGGTGTTCTTCACCGCGTTCAACCTGCTGGAAGCGTCCTTGCCGTCGCTGATCAGCAAGGTTTC GCCGGCGGGTGGTAAAGGAACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTTCGGCACTGGGCGGCATCCTCGGCGGCTGGTTGTTCCAGCAT GGCGGTTTGTCGGCTGTGTTCCTTGGATGCGCAGTCCTGGCTGCACTCTGGCTGGCCTTTGCTGTTACCATGCGCGAGCCCCCGTATGTGACGAGCCTGC GCTTGCCGTTATCGCCCGAAGCGATCCGCGAAGCCGGCCTGGTCGAGCGCCTGAAGGCCGTTGTTGGGGTAACAGATGCCGTAGTGGTGGCCGAAGAGGC CGCCATTTACATCAAATTGGACACCGAATTATTGGATCGCACGACCCTCGAGCAACTGGTCAATCCAGCGCCGTCGGCGAGCGAAGCCTAGGAGAACGTT
DNA Sequence for Gene
>PFL_5552 |ssb
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAACGCCGTGACCAACCTGAGTC TGGCCACCAGCGAGCAGTGGACCGACAAGCAGACCGGTCAGAAGGTCGAGCGCACCGAGTGGCACCGCGTGTCGATGTTCGGCAAGGTCGCGGAGATCGC CGGTGAATACCTGCGCAAGGGTTCGCAGGTCTACATCGAGGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGCTACACCACCGAAATC ATCGTCGACATGCAGGGCACCATGCAGCTGCTGGGTGGCCGTCCACAGGGCGACCAGCAAGGCCAGGGCGGCATGTCCAACTCGGCACCGCGTCCACAGC AGTCCCGTCCTGCTCCGCAGCCACAGCGTGAGTCGCGTCCAGCGCCACAGCAGGCCGCTCCGCAGCCGGCTCCGGACTTCGACAGCTTCGATGACGATAT TCCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCTGTTTTCAGCGTTCAGCATCGATAAAAACGGGGCCATGCAGATGGCCCCGTTTTTTTATGCCCGCGTTTAACCGGTGTGCCGCATCACTCAGCTCA AAGCGCCACTCGCCGCAGTCGGCCGCTCAGTGCGACCACCTGCTGCTCCGGCGTCGGAATCGGCCGCCCACTCAGGCCCATGCCTTCACTCACCAGCACC GCTTCTCCGACGCAGCACAGGTTGGAAGGCGTATCCAGGCCCTTGGCGAGTACTTGCACGCTGCGTTGCTGCAAATCGCAGCGCAGCAGGCGGCCGCTGA AGCGGGCGAAGCCGCCGTGCAGGACTTCGCCGGCCCAGTCCGGCGGCAACGGTTGCAGCAGCCGGTCGCACAGTTCCAGCACCAGGATCCGCTCCTGCGG GTCCAGCGCCAGCCCGGTGGGCAGTTGCAGTCCGCGAATCAGCACCTCGATCCTGCCGCTCTCGGGCCAGACCCGGATCACCTGGCCCGCCTTGTCGGCG
Amino Acid Sequence
>single-stranded DNA-binding protein
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTEWHRVSMFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEI IVDMQGTMQLLGGRPQGDQQGQGGMSNSAPRPQQSRPAPQPQRESRPAPQQAAPQPAPDFDSFDDDIPF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site