Pseudomonas aeruginosa AZPAE15022, NT38_RS22850
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15022 AZPAE15022_contig_30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAGGCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATG CGGTGGCGCATCTCCGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCAGGCGATCCGGTGCA CCAGCACGCGGGTCTTGCCCGAGCCGGCGCCGGCGAGGACCAGTTGGCGGCCCAGCGGCGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAG CAGGAGGGAGAGGTCGTCGTTCATCGCGGCATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGC CTGGCTGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAGGCAAACCACTACAAGAACAAGCGCCT
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| DNA Sequence for Gene |
>NT38_RS22850
ATGACCGTCCATGTCGAGCCCTTGGCGCTGCCGGGCGGCAGCACCGATGTACTGCGGCTCTACGCCCGCGAAATCGCCATCGAGCGTACCCGGCTCCTTT ATCTCGGCTCGCGCACGCCGACCCTGCTCATGCTGCTCGGCGGCGTGACCAGCGCCTGCCTGGTGTGGGGCAAGGTCAGCAGTTGGCTGCTCGGCGGCTG GCTGGTCTGGCTGGTGTTGCTCGCCGTCCTGCGCCTGCTGCAGGTCGCCGCCTTCCAGCAGGCCGACAGCCGTCGCCAGGCCAGCCGCCACTGGCGGCGG ACCTTCCTGTGCGGCGCCGGCGCCTCGGGCCTGACCCTGGCGTTCGCGGTGATCATGCTGGTCCCGGCCGATGCCTTCCTCCAGCAGGTGCTGGTGTTCG GCCTGGTGGCGGCGGCGATCCTCTCCGCCAGCGTCGCCTATGCGGTGAGCCTGCCGGCCTTCCTCACCTTCGCCTTGCCGGGCCTGCTGCCATCCATCGT TTTCCTGCTGTTACAGCCGCATAGCCTGTTGCAGGGCTGGGGCGTGCTCGGCCTGATCCTGCTGGTGGCGCTGCTGGTGGTCGCCGGGCAGATCCACCGG CTGGTGCAGGGCGCGCTGCTGCGACGCTTCCAGACCCAGGCGCTGAACCTGCACCTGGAGCGCGTCAACGCCGAGGCCGAAGCGCTCAATCGCAAGCTCG CCCAGGAGGTCGGCCAGCGACGCCTGGTCGAACGCGAGCTGCGCGCCGCCCGCGATGCCTTGCAGCGCCGGGTGGAGGCGCGCACCGAGGAGCTTGGCGC GACCAGCCAGGCGCTCAGCCAGAGCGAGGCGCGCCTGGCCATGGCCCTGGAGGCCAGCGAACTGGGGTTGTGGGACTGGGACCTGGAGAGCGGCCGGGTC CAGCATTCCTATCTCGAGGCGGTCTTCAGCGACGCCGGGGACGGTCCCGAGGACTATCGCAGGCTGATCGAAAGCATCCACCCCGGCGACCTGCCGCGCA TCCGTCGCGCCCTCGCCGAACATCTCAAGGGGCGCAGCGAGCTGTACCGGGTGGAGTACCGCGTGCGCGACCGGGAGGGCGGCTGGCGCTGGCTGGAGGA TCGTGGCCGGGCCATGGCTCGCGACCCGCGGGGACGGGTGACGCGGATGCTCGGCACGCGCAGCGACATCAGCGCGCGCAAGCGCCTGGAAGAGCAGCAG CAACTGGCCGCGACAGTGTTCGAGGCGGCCAGCGAGAGCATCGTGATCCTCGATCCGGCCTACAACCTGCTGGCGGTCAACCAGGCCTTCAGTCGCATCA CCGGCTATCGCCGCGAGGACGTGGTCGGGCGCAACGCCAGCCTGCTGGTGAATACCCCCGAGGCCCAGCGCCACTACCGGCAGATCCGCGCCGAGCTGCG CCAGCACGGGCAGTGGCAGGGCGAACTGGTGGATACGCGGAAGAATGGCGATCCCTATCCCCAATGGCTGCAGCTCAACCTGCTGCGCGACGGCAATGGC GAGGCGACCCACATCGTCGGTTTCTTCACCGATCTCAGTGCCCGCCGCGACGTCGAGGAGCGCCTGCGTCACCTGCTGCACTACGACGAACTGACCGGCC TGGCCAACCGCCGGTTGTTCCGCGAGCGGCTGCACGAGGCGGCCCAGCGGGCGCGCCAGGAGGAGGGCGGGCTGGCCCTGCTGCTGATCGACCTGGACCG CTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGTTGCTCAGGCAGATGGCCCAGCGCCTGCGGCGCACCGCGCCGGAAGCCAACACC CTGGCGCGTCTGGCCGGCGACGAGTTCGCCATTCTCCTCGATGGCGGCACCGGCACCGCGGCCCTGTCGCGCCTGGCCGAACGCCTGCTGGTCCAGTTGC GCCAGCCGGTGAGCGTGCTCGGCCACGAGCTGATCCTCGGCGCCTCGCTGGGGATCAGCCTGTTTTCCGAGCAGGCACGGGAAATCTCCGTGCTGATGAG CCAGGCGAACCTGGCGATGCAACATGCCAAGCAACTCGGCGGCAATACCTTCCAGTTCTTCCGCGACAACCTGCAGGACAGCACCCTCGAACGCCTGCGC CTGGAAACCCGGTTGCGCAAGGCGGTCGAGGAGGGCCAGCTGGACGTGCATTACCAGCCCAAGCTGTGCCTGGCCAGCGCCCGCCCGGACTCGGTCGAGG CGCTGGTGCGCTGGCACCATCCGGAGGAGGGCATGATCCCGCCGTCGACCTTCATCGGCCTCGCCGAGGAGTGCGGGTTGATCGGCGAGATCGGTGAATT CGTCCTGCGCCGGGCCTGCCTGCAGGCCGCCGAGTGGAGCCAGCGGGGCCTGAACCTGCGGGTCTCGGTGAACCTCTCGGTCCACCAGTTGCGCCAGGGC GACCTGCTCGACGTAGTGCGCTCGGCGCTGGCCGACAGCGGCCTGCCGGCGGCGCAACTGGAGCTGGAGTTGACCGAAAGCCAGTGGCTGGACGCCCTCG ATAGTGTCCTGGCGACCTTCCGCCAGTTGCGCGAGATGGGGGTGAAGCTATCGGTCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTGAAGCG CCTGCCGCTGGACTACCTGAAGATCGACCAGTCGTTCGTCCGCGACCTGACCCAGAACAGCGAGGATGCGGCGATCATCCGGGCGATCATCGCCATGGCC CACAGCCTCGACCTGAAGGTGGTCGCCGAAGGCGTGGAAACCATCGAACAGCGGGACTTCCTGGTGGCCCAGCGTTGCGACGAGCTGCAGGGCTACCTGA TCGGCCGGCCGTTGCCGGCCCATGCCCTGGAGGAAGGTTTGCGCCAGGCTCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGATCCGGCGGAGTATGCTGTAGCACTTTCGACTCCCACGAATTAAGGACGATTCATGCGCTCGAAGCCGCTTCTTCCCGCCCTCCTGCTGGTGGGC GCCGGTCTCTCCCCGCTGGCCCAGGCCAGCAGCGACGACTCCTGCTATCCCGATTGGTCGCTGGTCGGCGGCGGTGTCTGCGATACCCTGCCGTTCCTCG CCCCGGGCAACGACACCCGCGCCAACCTGCGCCTGCTGCTGGCCGACGCCGGCCACTGGCGGCTGGTGGAGGCGCCGCCGTCGGAGGAAGAGAAGCTCGA AGGCTACGGCCTGGTACCGTTCGGCCTGTTCCGCCTGCTGCCCGGCGACGGCAGCCAGCCGCCCGCGCCGCCGGCGGCGAGCGAGGCCGAGACACCGCCG CCTGCGCCAGCGCCCTCGCCGCTCGCCGAACTGGCCCGGCAGATGGGCGCCGAAGCGCTACCGGAAAAGATCGCCGGCGCCGAATTCTTCGAGGGCGAGG
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| Amino Acid Sequence |
>diguanylate cyclase
MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLMLLGGVTSACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRR TFLCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALPGLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHR LVQGALLRRFQTQALNLHLERVNAEAEALNRKLAQEVGQRRLVERELRAARDALQRRVEARTEELGATSQALSQSEARLAMALEASELGLWDWDLESGRV QHSYLEAVFSDAGDGPEDYRRLIESIHPGDLPRIRRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISARKRLEEQQ QLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLVNTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNG EATHIVGFFTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEEGGLALLLIDLDRFKLLNDSLGHEVADQLLRQMAQRLRRTAPEANT LARLAGDEFAILLDGGTGTAALSRLAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGNTFQFFRDNLQDSTLERLR LETRLRKAVEEGQLDVHYQPKLCLASARPDSVEALVRWHHPEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLRQG DLLDVVRSALADSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFGTGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMA HSLDLKVVAEGVETIEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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