Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3785 (dinP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTAGCAGATTGTGCACCTTTGCCAATGATGCTGCCTTTTTTGCGCCTCAATGTGAAAGCGCTGATCAGGCTGCAATGAAGGGGTGTCAGTGGCAGGGCAT GAGAAGGTACTTTTAACGCAGGCACAAAAAAGGCCACTCTTTCGAGTAGCCTTTTTTGATGTTTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGG GTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGCGGAATTATACAGAGAGATGGCGGGGTGTCAATGGTTAGTTTTAAAAAAGT GCTTTTTCTTCAATTGGTTAGCGCCGCCGCTGATGAGTTTTTTCGGCTCTGACGCCTGTATGGCGGGGCTCCGCAGTTTTTTCGACCACGCGTCAGGGAC TTTTCACTGCTTTTCACGGCGACCTTTTGCATCACTGGATGTTACTTGCCGGTACGAATGAGATACTGCTCAGCCATTGATTGCAAAATCCCATCAGGTC
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| DNA Sequence for Gene |
>PSPPH_3785
|dinP
ATGACGCAGCGCAAAATCATCCATATCGACTGTGACTGCTTTTATGCAGCCATTGAAATGCGTGACGAGCCCGAACTCGCTGGCAAGCCGCTGGCGGTGG GGGGCTCTGCAGAGCGGCGCGGGGTGATTGCGACCTGTAATTATGAGGCGCGCGCTTATGGGGTGCGTTCAGCCATGTCATCCCGGCATGCACTCAAGCT CTGCCCGGACCTGACCATCGTCAAGCCGCGCATGGAGGCTTATAAGGAGGCGTCACGGGAAATCCATACGATATTCCGGGATTACACCGACCTTATAGAG CCTTTGTCTCTGGATGAGGCGTTCCTCGACGTATCGGATGCAGGGCACTTTTCCGGCAGCGCCACGCGTATCGCCCAGGACATCCGTCGCCGGGTCTCGA ATCAGCTGCACATCACGGTTTCGGCGGGCGTCGCGCCGAACAAATTTCTGGCCAAGATCGCCAGCGACTGGAAAAAGCCCAACGGTTTGTTCGTCATTAC TCCGGATCAGGTCGAGGATTTCGTCGCCTCTTTGCCCGTTACCAAACTCCACGGCGTCGGGAAAGTCACTGCAGACAAGCTGGGGCGGCTGGGCATTGTC GACTGTGCCGACCTGCGAGGCCGCAGCAAGCTTGCGCTGGTCCGTGAGTTTGGCAGCTTCGGTGAGCGTCTCTGGAGTCTGGCGCACGGAATAGATGACC GTCCGGTGCAGAACGACAGTCGGCGTCAGTCAGTCAGCGTAGAAAATACCTACGACACGGATCTGCCTGATCTGGCTGCCTGCCTGGAAAAGCTGCCCGC GCTGCTGGAAACCCTCGGTAACCGGATGGCGAGAATGGAAGGGCAGTACCGGCCCGGCAAGCCCTTCGTCAAAGTGAAGTTTCACGACTTCACCCAGACA ACTCTGGAGCAGTCCGGAGCCGGAAGGGATCTGGGCAGTTACGAACAGTTGCTGGCGCAGGCGTTTGCCCGGGGTGCCAAGCCTGTTCGGCTTCTGGGTA TAGGTGTGCGTCTGCACGACCTGCGCGCAGCTCATGAACAATTGGAGTTGTTCTCGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAAATGATCAGCTGCGGTTACAGCCGCAGCCTTTCACATTACTGGCTCTGGGCGGGAACGGCGACGAGACGGCCAGCATCTCTGGCGAGTGATTTGAGA AATTCACCCTGCAACTGCGGATCGTTGCGTGTCAGTTCAATCAGGCTCTGTTCGAGCTCGCTGGCTTCTTCTTCCAGCCCCAGGTCAGAAAGGCGTTTGA CGCGATGCACCCATTGGCTGACCTCGTCATCTTCCAGATCGTCGTATATCAGTGCGTGGGCTTCCAGCAGCTTGCCGCGCAGAGAGTGGCTGATCGGCAA GCTGGCGTTCGCGTGAGCGCTGTCCTGGTCGTCTTCGACGTTGATATAAATGCGCGTGATACGGCTCAGGTCCTGTTCGGCAAAAGGACTGTCCAGCAGG TTCAGGCGCAGAACGCCGTTGCGGTCGGTGCTCATTTCATGAGTTTCGTTACCGGCCTTGACCATCACCGGGCGTTCATTCCACGGCAGCGTGGAGTTCT
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| Amino Acid Sequence |
>DNA polymerase IV
MTQRKIIHIDCDCFYAAIEMRDEPELAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMEAYKEASREIHTIFRDYTDLIE PLSLDEAFLDVSDAGHFSGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVASLPVTKLHGVGKVTADKLGRLGIV DCADLRGRSKLALVREFGSFGERLWSLAHGIDDRPVQNDSRRQSVSVENTYDTDLPDLAACLEKLPALLETLGNRMARMEGQYRPGKPFVKVKFHDFTQT TLEQSGAGRDLGSYEQLLAQAFARGAKPVRLLGIGVRLHDLRAAHEQLELFSQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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