Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3661 (ihfB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCAAGATCATCAGCGTTGACCGCAAGAGCCGCGTAATCAGCTTGTCCATCAAGTCGAAAGACGTTGAAGACGAGAAAGAAGCTATTCAGAGCCTGCGTA GCAAGCCTGAAGTCGCTGAAAGCACTGGTCCTACCACCATTGGTGACCTGCTGCGCGCGCAAATGGAAAAACAGAACTAAGTTCTGCTTGACCACAAAAA GGACGACTTCGGTCGTCCTTTTTTATTTCTGCTGCTAAGGCCTTACAGGCCCTTGTTTCAGGAATGTCTGCACATGCACTGCCCTAGCTGCCAAATGTCC TCAGTGGCCTCTCAGGCCGTCTCTATTCTTCGAATGCTTCAGCTCCCTTCCGATACGTCTCGCCTGTAATGTGGGTGTAATCTTTTCATGCCTGGTAGAC AGTGTTGAACATAAGTCAATAGATGGGCTGTTCAAATTCATCCGGTCATGCTAAAACCTTCCAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>PSPPH_3661 |ihfB
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTCGAGCTGGCCATCAAGACCATGCTTGAACAAATGT CCCAGTGCCTGGCGACCGGTGACCGAATTGAAATTCGGGGCTTTGGCAGCTTTTCGCTGCATTACCGTGCACCGCGAGTAGGGCGCAACCCGAAGACCGG TCGGTCGGTCAGCCTCGACGGCAAGTTTGTCCCGCATTTCAAGCCGGGCAAAGAGCTGCGGGATCGGGTCAATGAGGATGAAGAAGAGGGCTTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCATTCACCACAGGATCATCAGATGCGTATCTTCAAACGAGTCATTTTGATCGTCGCCGTGTTGCTTGCTGTTTTGGCAACAGCCGTGTTCGTTCTTG AAAACCGGCAATCTGTCGCGGTAACTTTTTTCGGCTGGTCAGCGCCTCAGCTTCCGTTGGCATTGCCTGTTGTCCTCGCTCTGCTGCTGGGCATGATTAT CGGCCCAGTGCTGACATGGATAACCAGTCTTCGAAAAAAACGTGCGCCTTCCCCTCGCTCCGTCTGAGCATCACAGCAGCGCTGATCAGGCGTCGCCGCA GGCATTTCTGGCGACGTGATATGCGCATTCTCCACGCCCTTGCGCTCAATTGAATGCCATGCGGCGTTTTGAGGCTGGCGTGTAATTTATGTCTATAGTC GGTATTTTTCAAAAAAAGCCGACTTATAATTCTGTCAGTTTATTTTTATGTTTTACGAGGAATAGTTACTTCGGTATGTAGGAATATTCTCTTTTTTAAT
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGRSVSLDGKFVPHFKPGKELRDRVNEDEEEGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site