Pseudomonas aeruginosa AZPAE14934, NS50_RS17455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14934 AZPAE14934_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTCGATGGCCACCAAGCAACTCTCGCAGAAGGGCGGAGCGGTGCTCCTGGAGCCGGTGATGAAGGTCGAGGTGGTGACCCCGGAGGACTACATGGG CGACGTGATGGGCGACCTCAACCGCCGGCGTGGCCTGATCCAGGGCATGGAGGATACCCCGGCGGGGAAGGTGATCCGTGCCGAGGTCCCGCTGGGCGAA ATGTTCGGCTATGCCACCGACGTGCGCTCGATGTCCCAGGGGCGCGCGAGCTACTCGATGGAGTTCGTCCGCTATGCCGAGGTACCGGCCAGCGTGGCCG AGGCGATCGTCGCCAGGCAGGGCCGCTGAGAGCCGCCGCGCGCCGCCGAGGCCAGCGGCGGCGCGCGCCTTTGCGGGAGCGGCAGCCGCATCTTCGGCGC CGATGCGCTTGCCAAGCGGGGTTTTTGACGCCCCCTGGATGCTTAACTATAAGACAGTGACCAAGGCCCGCACCTATACGGTCACAAGGATGGCGAATCG
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| DNA Sequence for Gene |
>NS50_RS17455
ATGCTTGCTTCAGCGATTGCCAGCGGTACCGCAGTCTCCCAGGTCTCCAAGCATCTCCTAATGTTCCTGGCCGCCCTTTTCCTCGCCCTCGGTGCATGCG GCTGGGCGATCCTGCACATCGCCAGACACCAGGACGACATCGCCATCGAGCAGAGCCATTTCTACGTGGAAAAGGCGCTGCAGAATCGCCGGGAAAATTC CGAGCAGTTCTCCACCACCTATTCCTTCTGGACCGATGCTTACGTCTATCTGGGAAACCGGGTCGATGTGGACTGGGCCTTCACCAAGAACAACCTCGGC TCGGTGCTCTACACCACCAACGGCTACGACGGCGTCTTCGTCATCGACGACCGTGGCACTCGCTACGCCATGCTCGAGGGCGAGCTTTCCGAACGCTCGC TGGCCGACTCGCTGAACGCCGACACCGGGGACATCCTCCGCTCCGCACGCCGTGCCGCGGTGGACGAAGCGGCGATCAGCCGCTACGTCGACTTCGACGG CGCACCGGCGATCCTGGTCGCCTCGGCGATCAAGCCCACCAGCGATCATGCGCCCATCGACCTGGCCAAGGCCTCGGTGATGGTCTTCGTCGACCGGCTG ACCCCGGCGAAGCTGGCCAAGCTCGGCGGCGACTACGGCATCGCCAACCTGCACCTGCTGGCCGGCGGCGCGGCGGGCGACAAGGAAAGCCTTGCCCTGG AGGGCACTCCCCATCGCCTGGCCTGGGTGTCGTCGCGTCCGGGTAGCGCCATGCTGCGGGAGACCGCGTTGCCGCTGCTGGGAATCTTCGTGCTCGCCGC CGGGCTGCTGTTCTGGCTGAGCCGCAGCGCCGTGCTCAACGCCCGCGCGGTGGATCGCCAGCAGAAGGTCCTGAAACGCAGCAACCAGGCCCTGCTGGCC AGCGAGGAACGTTTCAAGTCGATAGCCGAGGCGGCCTCGGACTGGATCTGGGAAGTCGACGGGCATTTCGTCTTCACCTATCTCTCCGTGCGCTTCCGCG ACGTCACCGGCTACCAGCCGGAGGCCTGGATCGGGCGGCGGCTGGACGAGTTGCTGGATAGCGATACGGTGAACATCGTCAAGTGGCTGGAAGGGCTGCC CGATGCCGGTGCGCCGTCCAGCCTGGTCTGCGCTTTCCGCGACAGCCAGGGCCAGGCGCGGGTCGGCAAGCTGAGCGCCAGCGCGATCCGCAACGGCGTC GCCAGCGGCTATCGCGGCACGGCGGCCGACATCACCGACGAGGTCGAAGCCCATGCGAAGATCCAGCATCTGTCTCTGCACGATGCCCTGACCGGCCTGC CGAACCGCAACAAGCTGTTCCAGTTCCTCGAACGCCTGCTGGCGGAAAAGGCTGGCAAGTCGCCGGTAGCGGTACTGATGCTCGACCTCGACCGCTTCAA GCCGATCAACGACCAGCACGGCCATCCCGCCGGCGATGCGGTGCTCTACGCCATCGCCGAACGGCTGCGCGCCTCGACCCGCGACCAGGACATGGTTGCC CGGCTCGGCGGCGACGAGTTCGTGGTGGTCAGTACCCACGTGTCGTCGAAGCTGGAAATCGAGAAGTTCTGTAGCCGGCTGATCGACGTGATCAACCGCG AGGTCGCCTACGAAGGGCACAGCTTCCATGTCGGCGCCAGCATCGGCGTGGCCCTGGCGCCGGAGCACGGCGGCGATCCGCGCGGCCTGCTGCGTTGCGC CGACGTGGCGATGTACGAGGCCAAGGCCGCGGGGCGCAATACCTGGCGTTTCTACTTGGAAGCCATGGACTCCCATCTCGCCGAGAAGAAGCTGCGCGAG ACCGAGTTGCGCGCCGCCTTGCAGAACGGCGAGTTCGAGTTGTACTACCAGCCGCGTTTCCTGGCGCAGGAACAGACGATCGCCTCGGCGGAGGCGTTGA TCCGCTGGAACCATCCGCGCCGCGGGCTGATCGGCCCGGACGAGTTCATCGGCCTGGCGGAAGAAAGCGACCTGATCGTGCAGATCGGCAACTGGGTGCT GCGCGAGGCCTGCGCCACCGCCGCCTCCTGGCCGGGCGAGGTGATGGTCTCGGTGAACGTGTCGCCGGCGCAGTTCATGACCGGCGATATCGTCTGGCAG GTGCGCGAGGCGCTGCGCCTGGCCCACCTGGATGCCCGCCGGCTGGAGCTGGAGGTGACCGAGAACGTCATGCTCAACGATGTCGACGGCGCGCTGCGGA CCATGACGGCCCTCAAGGAACTGGGCGTCCGCCTCAACATGGACGACTTCGGTACCGGCTATTCCTCGCTCGGCTACCTGCGCACCTATCCCTTCGACAG CATCAAGATCGACAAGCGCTTCGTCGCCAGCATGGAGAAGACCGGGCGCGACCGTTCGATCGTGCAGGCCATCATCAATCTCGGCAACGCCCTGAACCTG CGGGTCACCGCCGAGGGGGTGGAGACCGAAGGGCAGATGCATATCCTGCGCGACGAGCAATGCCACGAACTGCAAGGATTCCTGCTCAGCCGGCCGCTGG ATGCGCAGGGCCTGCGCGACCTGCTGGCGCGCGAGGCGGGGCAGACCCAGGCGCCACAGGTTTCCGCCGAGGGCCATGCTGCGCGCCGCCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGGGGCAGAAGAGACCACGCGGAGCCTCAGCGGCCCTCGGTTCAGCGAACGCCCTGCGTATGGTTCAGAGAATGCTCAACTGATTATTTGACCTGACT GATTCCCTTCCCGTCTTCGCTTGCCGACACTCCGTCCTTCCCATGGCCTTGTGCCAGGGCCAGCGCCGGTGGTCGCCACCCGCTTCGGGCGAATCGCGGT GATGGTCTGCTACGACCTGGAGTTTCCCGAATGGGTGCGCCTGCCGGCGCTGTCCGGCGCACAACTGCTCTGCGCACCGGTGAACTGGCCGGCGGCACCG CGTCCCGAGGGCGAGCGGCCGGGCGCGGCTGGGCGAATGAAAAAGGGCGCGGGCCAGTATCGGCGCCGCGCCCTTTTGCCGGAGGAGAACCTTATTCCAG TTCGGCTGCGCTCTCTTCCTGGCGCTTCAACCCGGTATGACTGATGGCGTGCAGAGCGGTATTGAACTGTACGGTCTCGTTGAAACCCTTGACGATCTGC
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| Amino Acid Sequence |
>sensory box protein
MLASAIASGTAVSQVSKHLLMFLAALFLALGACGWAILHIARHQDDIAIEQSHFYVEKALQNRRENSEQFSTTYSFWTDAYVYLGNRVDVDWAFTKNNLG SVLYTTNGYDGVFVIDDRGTRYAMLEGELSERSLADSLNADTGDILRSARRAAVDEAAISRYVDFDGAPAILVASAIKPTSDHAPIDLAKASVMVFVDRL TPAKLAKLGGDYGIANLHLLAGGAAGDKESLALEGTPHRLAWVSSRPGSAMLRETALPLLGIFVLAAGLLFWLSRSAVLNARAVDRQQKVLKRSNQALLA SEERFKSIAEAASDWIWEVDGHFVFTYLSVRFRDVTGYQPEAWIGRRLDELLDSDTVNIVKWLEGLPDAGAPSSLVCAFRDSQGQARVGKLSASAIRNGV ASGYRGTAADITDEVEAHAKIQHLSLHDALTGLPNRNKLFQFLERLLAEKAGKSPVAVLMLDLDRFKPINDQHGHPAGDAVLYAIAERLRASTRDQDMVA RLGGDEFVVVSTHVSSKLEIEKFCSRLIDVINREVAYEGHSFHVGASIGVALAPEHGGDPRGLLRCADVAMYEAKAAGRNTWRFYLEAMDSHLAEKKLRE TELRAALQNGEFELYYQPRFLAQEQTIASAEALIRWNHPRRGLIGPDEFIGLAEESDLIVQIGNWVLREACATAASWPGEVMVSVNVSPAQFMTGDIVWQ VREALRLAHLDARRLELEVTENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVASMEKTGRDRSIVQAIINLGNALNL RVTAEGVETEGQMHILRDEQCHELQGFLLSRPLDAQGLRDLLAREAGQTQAPQVSAEGHAARRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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