Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2041
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGGCAAGTTGCTGGAAAATGTCTGGCCGAGCCTGAAACCGCTGCTTTGAGGCTTTCCCGGACGGGGGCTTTCGGCTAATGTGGCGCCCCCGATCTGGAG CCCCCCATGCCGCGTCCCGCCTGGTCCCTGTATGCCTATCAAATGCTTGAGCCCCATGAGCAGCTGGATCTGTTCGCCTGTCAGGAAGTGCGCGTCCATC TGATTGCTCGCCAATTGGAGCTGGGCGGCTCGATCGACCGGACGTTGTGTGGCACGTTGTTGCCTGCCCAGCCGCAGATGCGCGCCGTCGAACTGCAAGC CATGCGCGATGAGCGCCTTTGCCCGCTGTGCAAGGCCATCATGGATGCGCAGCGCAGGGGCATGAATCCGATCTGGCCTGAACTCTAGCTGTCGCCGAAA CGCGCCGGTCAGGCGCAGATATCCCCGATCCGGCAAGTGCCGGTGTACACTTCAGTTGTTGTTTCCATCTCTATAGTCGTTACCCGAAGGATCTTCCCGG
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| DNA Sequence for Gene |
>PSPPH_2041
ATGTTGTCGCGCATTCCAGCCGTTACCCGCTGTCTGTCGCTTGCTGCTCTGTGCGCGGCGAGCTCTGTCCATGCTCTGGAATTTCCGTTGCCGCCGCCCG GCGAGGACATCGTGGGCCAGGTGCAGGTCATCAAGGCCAAATACGAGGACACCTTTGCCGATCTGGGCACAAAATACGATCTGGGTTATCTGGAAATGAT CGCGGCCAACCCTGGTGTTGACCCCTGGTTGCCGGGTGCAGGCAAGGACATCGTGCTGCCGACCCGCTTCATTCTGCCGCCGGGCCCGCGCGAAGGGATA GTCATCAACCTTGCCGAGTACCGCATGTATTACTACCCCAAAGGGCAGAATGTCGTGCACACCTATCCGCTGGGTGTCGGTCGTGAAGGCTGGGGTTCGC CCATCGGGGTGACCAAGGTAACGGCCAAGACGCCAAACCCGACCTGGACGCCACCTGCCTCGATCAAGGCCGAGCATGCTGCCGACGGTGATCCGCTGCC TGACGTAGTGCCTGCCGGTCCGGATAACCCGCTGGGGCCGTTCAAATTCGGTCTTGGGCTTTCCGGCTACCTGATCCACGGTTCGAACAAGAAGTTCGGT ATTGGCATGCGCACCAGTCATGGCTGTTTCCGCATGTACAACAACAACGTGCTGGAACTGGCCGACATGGCTCCGGTCGGTACGACCGTGCGAATCATCA GCGAGCCCTACAAATTCGGCATCAGTGGCGGCAAGGTTTACCTTGAAGCACACACACCGGTCGATGACCTGGGCAACCCTTCGGTGGTCGACAAGCACAC TGCGGTCATCAATGCACTGCTCAAACGTGACGACCTGGCCAACAACCTGCGCATGAACTGGGACGTAGTACGTGATGTGGTCGCGGCCGAAGACGGCATG CCGGTGGAAATCGCAGAACCGGGCAAAGCGCCTGCGAGTGCTGAAGAGCCTGTGATTTTTCAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAACCTGTTCGCGCGCCAATGCTATGCCTTACACAACGGTTCTGCGAAATCAGGCGAATGACCATCGTGCCTACGCTCCGCGTGGGAATGCAGTTCGT GACGCTCCGCGTCACATCTGTGCTGCCGCACAACATCCACGCCTTACGCGCAGCCGCTGCCAGAGCAGTGCTTTTCAACCGCGATGGCACTGACGACGCA GAGTGCGACCTTAGTGACGGCTGAGCCCTGACGCTGATCCGGGGGATGCGAGGCAGGACGCCGAGCAAGCCGCACCGGGCCAAGGATGGCCCGTTGCGGC GGCCCCCGGATCAGTGACAGGGCGAAGGAACCCGACGAAGTCGGGCCGGAAACAGGAGCGAGGACTTTGCCTACTTTGGTCCCTCAAAGTAGGGCGCCGT AAGGGCGCAAAGGTGACCTGAGCTAGAAACATATATCACTGATGTCTCGGAACCGCCGTGTGACGCAGAGCGTCACGAACTGCATTCCCACGCGGAGCGT
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| Amino Acid Sequence |
>ErfK/YbiS/YcfS/YnhG family protein
MLSRIPAVTRCLSLAALCAASSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTKYDLGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGI VINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGPFKFGLGLSGYLIHGSNKKFG IGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFGISGGKVYLEAHTPVDDLGNPSVVDKHTAVINALLKRDDLANNLRMNWDVVRDVVAAEDGM PVEIAEPGKAPASAEEPVIFQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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