Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0523
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGACCTGCGTGCACTGGTCCTCAAGGCCAGGCCGCAGGTTATTGTCATGCCGCACCCGGCCATCGATCCGCATCCCGACCATATCTGTGCCCAGGCAGC CGTGCGTGAAGCGCTGGCCGGCCTTGAATGGCAGCCAGACGTGGTGCTCGGTTACGCCAACCACTTGCACGACAACGACCGTTGGCCAATGGGCGATGCC TACAGTGGCATCAGCCTGCCGCCGGTATTCGATGCCAGTCTGCCGCTGGTACCGTACAGCCTGCACTTATCGGTTGCGGCCCAACGCGACAAGGCAATGG CGCTGGGTATGATGCATGACCTGTTGCCGCCGATGCCGTTCAAACGCCGTGTGCGCCGTACGTTGCAACGCGTTCTGGCCGGTCGCCACTGGCCGGCCGA AGGCGAAAACGAATTCTTCCGCAAAGCTGTGCGACGACACGAGTTGTTCTGGCGCAGCCGTGACATCTGATTCAGCAGGCGCAGTACTGCAAGGAAAACC
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| DNA Sequence for Gene |
>PSPPH_0523
ATGAAAGTTCTACTTCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCGTCTCTATGACGGCATCGCGGCACACTGCGAATGCGATGTGCGCTGGCTGA GTTCCGCGGAGCAGCGCAACCTGCGTGGCTATTTCCGCCGCGAAGTGGACGTCAGCCGTTATGACCGGATCGTGTTTTTCCTGCGCTTCAAGCAGGAAGT GCGTCAGGTCGGGTTCATCCGCACGATTCCCAACCTGGTCATCCTTGAACACGATGCCTACCAGAACTACATTCCTTGCAAATACACCGGCAAGTTCAGT GCGCACTATCGCAAGCTGCCTTGGGCGCGGGTGATCTGTTCGGGGTTCATGGTCAGCGAGCGCCTGCGCCAGGAAGGCTTCGACGCGGTGTTCGTGCCCA AGGGCTATGACCAGAGCCTGTTGCAATTGCAGGCGCGTGAGCGTGACATCGAACTGGCGTTCGTGGGCAGCACCAACAGTGTGGCCTACAGCGGCCGCAA GGCGTTGCTGGATGAGTTGGGGCAGGTCGAGAATCTGCTCGTCACGCGTACCAAGTCCGGGGAAGAGTATTGCGACACCCTTAACCGCATCCGCTTTTTC GTCAGTGCCGATGTCGGCATGGGCGAGTACATGATCAAGAATTTCGAGGCCATGGCCTGCGGTTGCGTGCTACTGGCCTTTGATCAGGGCGCTGAAGAAA ATCGCGCGCTGGGCTTTGTCGACATGCACAACATCGTGCTCTATCGCGACATTCCCCAGCTTCGTGAAAAGCTGGCGATGTTGCGCGAGAACACCGTGCT GGCCAGCGAAATATCCTGTAATGGGCAGACTTTGGTCGAAGAACGCTTTACATTCCATGCCCTTGGAAAAGCCATCGTGGACGCAATGCATTCGCCGCTG CGCAGCATGCCGGCGATGAGCTGGCTCGACCGCCTGCGGTCACGATTGGGATGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAATTATGAATATTCAATGATTGGGAACGAATGATGGTATTCAGCGAAAACAGCGACATTACGCTGGTTGTCACCAGTTGTGGTCGGTTCGACCTGTTG AAGCGCACTCTGGAAACGTTCGACCATTTCAACACTGCGCCCATACGCCATGTGCTGATTACCGAAGACTCCGGCGATGCCCGGGTCCAGGCGTGCATTC CAGAGCACTGGCACCCGCATACGCGCTTCATCATCAACAACCCTAAGCTGGGGCAGATGCGCTCTGTCGATGCGGCCTATTCGCTGATCGAAACGTCCTG GGTGTTCCATTGCGAAGACGACTGGGATTTCTACCGTCCGCACTTCATCGAAGAGTCGATGACGCTGCTGGAACACGACCCTCAGGCCTTGCAGGTCTGG TTGCGCAGCTACAATCATGATCTGCGTATCCACAGCCCTTACGTTTACCTGAACGAGCGTGAAGTGTTCGAAGGTATCCCGTTTTACAAGCTGGGCTCGC
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| Amino Acid Sequence |
>hypothetical protein
MKVLLLVQKEQRAILDRLYDGIAAHCECDVRWLSSAEQRNLRGYFRREVDVSRYDRIVFFLRFKQEVRQVGFIRTIPNLVILEHDAYQNYIPCKYTGKFS AHYRKLPWARVICSGFMVSERLRQEGFDAVFVPKGYDQSLLQLQARERDIELAFVGSTNSVAYSGRKALLDELGQVENLLVTRTKSGEEYCDTLNRIRFF VSADVGMGEYMIKNFEAMACGCVLLAFDQGAEENRALGFVDMHNIVLYRDIPQLREKLAMLRENTVLASEISCNGQTLVEERFTFHALGKAIVDAMHSPL RSMPAMSWLDRLRSRLGW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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