Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCGCTTGAGCCCGACGTCCTGATCTTCGACCACCAGATCCAGCAGCAGACGGTGCCGGGTACAGAAGTCGCCGATGGCCGGTGCCCACCAGGTTGCCAGG CTGTCGGCATTCAAGGCGATCCGCAGACGCTCGGGCAGCCCCTCTTCATCAAGCGCCGGCACCTGACTTTGCAGGTCACGCTCCAGCAAACGCACCTGCT GCACATGGTTGAGCAGACGCCTGCCGATGTCGGTCGGAACAGGCGGCGTGGCGCGCACCAGTACCGGCTGACCAATGCGGGCCTCGAGCAATTTGATGCG CTGCGAGATGGCTGACTGGGACAGCCCGAGCACCTGAGCCGCGCGCTCGAACCCAGCCTGCTCGATCACAGCCGCCAGTGCCGATAACAGCTTGTAGTCG AACATCAGTTTTCCTAATGAGCGATGATGATTATTGGTTTTCCTTATAGCGCTCAACGCAGGAAAATCGCCACCTGAATCTGCTCAATGGAAACGTCTTT
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DNA Sequence for Gene |
>PSPTO_4362
ATGTGGCAAAGCTACTTCAACGGCCTGCTGATCGCGGCAGGCCTGATCATGGCTATCGGTACTCAAAATGCTTTCGTGCTGGCTCAGGGGCTGCGCCGTG AACATCACGTGCCCGTCGCGATGCTGTGCGTTGTCTGCGACGCCATTCTGGTGGCGGCTGGTGTTTTCGGCCTGGCCAATGTGCTGGCACACAACCCCAC CTTGCTGGCGGTGGCGCGCTGGGGCGGCGTGATTTTCCTGACCTGGTACGGCCTGCAGGCATTGCGGCGCGCCTGCTCGCGGCAAAGTCTGGAGCACAGC GCAGCGGCGGGCACACGGTCACGTCGTACCGTGCTGCTCAGTGCGCTGGCCGTTACCCTGCTCAACCCGCATGTCTATCTGGACACCGTGCTGCTGATCG GCTCGCTCGGGGCGCAACAGAGCGTGCCGGGTGCCTATGTCGCAGGTGCCGCCAGCGCTTCGCTGTTATGGTTCTCGGCCCTCGCCATCGGCGCGGCATG GCTCGCCCCCTGGCTGGCACGCCCTGCTACATGGCGCATGCTTGACGTAATGATCGCTGTAATGATGTTCAGCGTAGCGTTCCAGTTGATCCGTTCAGCC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGGTTTCATGACCGTCGGGGCAATTGCGCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGGCGCAGACCCGGTGCTATGATCCGGGGTCTGCG CCGCAAAAGAGTAAAACTCCCGGTGCATGCTGTATCTGGCCGCCCGTGATCGGCCGTGCGATTACCGCAATTGACCTGAAAGGAGATAAACCATGGCTTT TGAATTGCCACCACTGCCCTACGCCAAAGACGCTCTGGTGCCGCACATTTCTGCGGAGACTCTGGAATATCACCACGACAAGCACCACAACACCTACGTC GTGAACCTGAACAACCTGGTGCCCGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAGATCATCAAGACTTCTTCGGGCGGTATCTTCAACAACGCCGCTC AGGTCTGGAACCACACGTTCTACTGGAACTGCCTGGCGCCTAACGCTGGCGGCGAGCCTACCGGCGCTCTGGCCGAGGCGATCAACACTGCATTCGGTTC
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Amino Acid Sequence |
>LysE family transporter
MWQSYFNGLLIAAGLIMAIGTQNAFVLAQGLRREHHVPVAMLCVVCDAILVAAGVFGLANVLAHNPTLLAVARWGGVIFLTWYGLQALRRACSRQSLEHS AAAGTRSRRTVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSALAIGAAWLAPWLARPATWRMLDVMIAVMMFSVAFQLIRSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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