Pseudomonas syringae pv. tomato DC3000, PSPTO_4362

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGCTTGAGCCCGACGTCCTGATCTTCGACCACCAGATCCAGCAGCAGACGGTGCCGGGTACAGAAGTCGCCGATGGCCGGTGCCCACCAGGTTGCCAGG CTGTCGGCATTCAAGGCGATCCGCAGACGCTCGGGCAGCCCCTCTTCATCAAGCGCCGGCACCTGACTTTGCAGGTCACGCTCCAGCAAACGCACCTGCT GCACATGGTTGAGCAGACGCCTGCCGATGTCGGTCGGAACAGGCGGCGTGGCGCGCACCAGTACCGGCTGACCAATGCGGGCCTCGAGCAATTTGATGCG CTGCGAGATGGCTGACTGGGACAGCCCGAGCACCTGAGCCGCGCGCTCGAACCCAGCCTGCTCGATCACAGCCGCCAGTGCCGATAACAGCTTGTAGTCG AACATCAGTTTTCCTAATGAGCGATGATGATTATTGGTTTTCCTTATAGCGCTCAACGCAGGAAAATCGCCACCTGAATCTGCTCAATGGAAACGTCTTT
DNA Sequence for Gene
>PSPTO_4362
ATGTGGCAAAGCTACTTCAACGGCCTGCTGATCGCGGCAGGCCTGATCATGGCTATCGGTACTCAAAATGCTTTCGTGCTGGCTCAGGGGCTGCGCCGTG AACATCACGTGCCCGTCGCGATGCTGTGCGTTGTCTGCGACGCCATTCTGGTGGCGGCTGGTGTTTTCGGCCTGGCCAATGTGCTGGCACACAACCCCAC CTTGCTGGCGGTGGCGCGCTGGGGCGGCGTGATTTTCCTGACCTGGTACGGCCTGCAGGCATTGCGGCGCGCCTGCTCGCGGCAAAGTCTGGAGCACAGC GCAGCGGCGGGCACACGGTCACGTCGTACCGTGCTGCTCAGTGCGCTGGCCGTTACCCTGCTCAACCCGCATGTCTATCTGGACACCGTGCTGCTGATCG GCTCGCTCGGGGCGCAACAGAGCGTGCCGGGTGCCTATGTCGCAGGTGCCGCCAGCGCTTCGCTGTTATGGTTCTCGGCCCTCGCCATCGGCGCGGCATG GCTCGCCCCCTGGCTGGCACGCCCTGCTACATGGCGCATGCTTGACGTAATGATCGCTGTAATGATGTTCAGCGTAGCGTTCCAGTTGATCCGTTCAGCC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGGTTTCATGACCGTCGGGGCAATTGCGCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGGCGCAGACCCGGTGCTATGATCCGGGGTCTGCG CCGCAAAAGAGTAAAACTCCCGGTGCATGCTGTATCTGGCCGCCCGTGATCGGCCGTGCGATTACCGCAATTGACCTGAAAGGAGATAAACCATGGCTTT TGAATTGCCACCACTGCCCTACGCCAAAGACGCTCTGGTGCCGCACATTTCTGCGGAGACTCTGGAATATCACCACGACAAGCACCACAACACCTACGTC GTGAACCTGAACAACCTGGTGCCCGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAGATCATCAAGACTTCTTCGGGCGGTATCTTCAACAACGCCGCTC AGGTCTGGAACCACACGTTCTACTGGAACTGCCTGGCGCCTAACGCTGGCGGCGAGCCTACCGGCGCTCTGGCCGAGGCGATCAACACTGCATTCGGTTC
Amino Acid Sequence
>LysE family transporter
MWQSYFNGLLIAAGLIMAIGTQNAFVLAQGLRREHHVPVAMLCVVCDAILVAAGVFGLANVLAHNPTLLAVARWGGVIFLTWYGLQALRRACSRQSLEHS AAAGTRSRRTVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSALAIGAAWLAPWLARPATWRMLDVMIAVMMFSVAFQLIRSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site