Pseudomonas syringae pv. tomato DC3000, PSPTO_3154 (cobM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATAATGCCCACTCAAACCATGCCTGACCGCATCAGGCCTGAGCACTCGACCGTCCGCCCCGGCACGCCTCTGGTAGTCGGGCTGGGCTGTCGACGCGGTT GTTCGGCGACCGCGTTGCGCGAGCTGATCGAGAACAGGCTTCGAGCGCTGGAGCTGAACCTGGGAAGCATCACCGCGCTGGCCTCAATCGATCTGAAAGA CAAGGAACCGGGCCTGCTTGCACTGGCGGCGCAACTGGCTGTGCCGCTGGTATTTTTCAACGCCGCGCAACTGGTGGCCTGGGAGCTGCACCTGACCCAC CGCTCCGCGCAAGTCTTTCAGACCACAGGCTGTCACGGTGTAGCCGAAGGATCGGCACTGGCCCTCGCCGCGCAGCTGGGCGACGGTACGGCGCGGCTGC TGATAGAGCGGCAAAAAACCACTCAAATGACATTTGCCTTGGCGTCCAGCCCGGCTGTGGGCGGATAATCGCGCCGCGCTCATTGACCCCGGAGTTTCCA
|
|
| DNA Sequence for Gene |
>PSPTO_3154
|cobM
TTGACTGTCTATTTCATCGGCGCAGGCCCTGGCGATCCCGAGTTGATCACCGTCAAGGGGCAACGCCTGATCCGCACCTGTCCGGTCATTATCTATGCAG GTTCGCTGGTGCCGCTCGCCGTGCTGGAAGGCCACCAGGCGGTGCAGGTGACCAACAGCGCGGAACTGCATCTGGAGCAAATCATTGATCGGATCAAGAC CGCTCATGCGCAAGGCCAGGATGTTGCTCGTGTACATTCCGGCGACCCTAGCCTGTACGGTGCCATTGGCGAGCAGATCCGCCATTTGCGTGAACTGAAT ATCCCCTTTGAAATCATTCCGGGAGTAACTGCGACGGCCGCCTGCGCTGCGTTACTGGGCGTGGAGCTGACGCTGCCGGATATTTCGCAAAGCGTGATTC TGACCCGCTACGCCGACAAGACCTCAATGCCGAGCGGCGAAGAACTCGCCAGCCTGGCAAGCCACAGGGCGACCATGGCGATTCATCTGGGCGTAAATAA CCTGCACAGAATCGTCGAAGAGCTGACCCCGCATTACGGCACCGACTGCCCGATTGCCGTGGTACACCGCGCCAGTTGGCCGGATCAGGAATGGGCAATA GGTACGCTGGCAGACATAGAGGAAAAAGTGCGAGCCAAAGGCTTTCGCCGCACCGCACTGATCCTCGTCGGCCGCGTACTGGCCGCCGACACATTTGGCG AATCCTCGCTGTACCGGGCCGGGCATGCGCACCTGTTCAGGCCCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCTCGTTCGCAGGCTCGCCGTTTGTGTGAGTGGCAGGGGCGGCCGATCCGCGTTACTCACGAAGGGGCCGGTGCAGCCTCCGAGATCTACTGATCACCG ATCGTCAGCCTTCGCGAGCAAGCGAAGCGTCGCCCGGCTCGCGCTCAGGCACTCACATCGCTTACCTGATCAAGCAGCCACCTCATACAACTTCGGCGCT AGCACCTCGCCGCTCTCCAGGCTTTTGCGCAGGATCTCGGCCTGCAATGCAGCAGCCTTCATGGCGGCTTCCTTGATGTGACCATAACCGCGAATCTTTT CCGGCAGGCGTGCCAGGCTCAGCGCCGTATGGCGGTTCTGCGTCTGGAGATGCTGCAGGATCAGTTCGACATCGCCAACATAACGATCAATAAGCGCCCT CTCCTGCTTGCGCTCCAGGCTGCGACCGAACGGGTCGAACGCTGTGCCACGGAGGAATTTGAATGTCGCCAGCACATCGAACGCGCGCAGCATCCACGGC
|
|
| Amino Acid Sequence |
>precorrin-4 C(11)-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRTCPVIIYAGSLVPLAVLEGHQAVQVTNSAELHLEQIIDRIKTAHAQGQDVARVHSGDPSLYGAIGEQIRHLRELN IPFEIIPGVTATAACAALLGVELTLPDISQSVILTRYADKTSMPSGEELASLASHRATMAIHLGVNNLHRIVEELTPHYGTDCPIAVVHRASWPDQEWAI GTLADIEEKVRAKGFRRTALILVGRVLAADTFGESSLYRAGHAHLFRPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|