Pseudomonas syringae pv. tomato DC3000, PSPTO_0823 (pilR)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0823
NCBI Old Locus Tag	PSPTO0823
Name	pilR Synonym: PSPTO0823
Replicon	chromosome
Genomic location	889587 - 890927 (- strand)

Cross-References

RefSeq	NP_790670.1
GI	28868051
Entrez	1182448
INSDC	AAO54365.1
NCBI Locus Tag	PSPTO_0823
NCBI Old Locus Tag	PSPTO0823
UniParc	UPI00000085A9
UniProtKB Acc	Q889C7
UniProtKB ID	Q889C7_PSESM
UniRef100	UniRef100_Q889C7
UniRef50	UniRef50_G8QCU7
UniRef90	UniRef90_Q889C7

Product

Feature Type	CDS
Coding Frame	1
Product Name	type 4 fimbriae expression regulatory protein pilR
Synonyms
Evidence for Translation
Charge (pH 7)	-2.49
Kyte-Doolittle Hydrophobicity Value	-0.333
Molecular Weight (kDa)	50.0
Isoelectric Point (pI)	6.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004209 (486 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0823 Search term: pilR Search term: type 4 fimbriae expression regulatory protein pilR

Human Homologs

References