Pseudomonas aeruginosa AZPAE14550, NQ79_RS17835
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14550 AZPAE14550_contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGACCAGGCCGTCCATCTGCAGTTCGTCCACTGCCTGGCGGATGTCGTCGAGTTCCATCCGGTTCACGCTGCGCTTCAATTGTTCGACGTTCAGCATC TGTCTGTCCTTTCCGTATCCGTTACCGAGCATTCATCGAAGGCTGAGCTTGCTGTACGAATATACAGTTAAATGTGCGATGATGCGAGCGAACGGAGGGC GAGGCGATGCAGTGGAACAGGAGGGGCGGAATGCAAAAAGCCCCGGCGCTATCGCTAGTGCCGGGGCTTTTCGAATGTGGTTGCGGGAGCTGGATTTGAA CCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGGCGCATTCTACGGACTCTCGTCGGGCTGTCAATCGAT TTTTCGAAAAAAGTGTTTTTTCTTCAAATGCTTAGCGCTTGCCCAATGTTAGAATTCAGCGCTCCGGGGCAGGCCCGGCGGGGCTTGTAGCGAGATTCCG
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| DNA Sequence for Gene |
>NQ79_RS17835
GTGCGGAAAATCATCCATATAGACTGCGACTGTTTCTACGCCGCCCTCGAGATGCGCGACGACCCCAGCCTGCGCGGCAAGGCGCTGGCGGTTGGCGGTT CGCCGGACAAGCGCGGAGTGGTCGCCACTTGCAGCTACGAGGCGCGAGCCTATGGCGTGCGCTCGGCGATGGCCATGCGCACGGCGCTCAAGCTGTGTCC CGATCTGCTGGTGGTGCGCCCGCGTTTCGATGTCTACCGGGCGGTGTCGAAGCAGATCCATGCGATCTTCCGCGATTATACCGATCTGATCGAGCCGCTT TCGCTGGACGAGGCCTACCTGGACGTCAGCGCTTCGCCGCATTTCGCCGGTAGCGCCACGCGGATTGCCCAGGACATCCGCCGCCGGGTGGCCGAGGAGC TGCGCATCACCGTTTCGGCGGGCGTCGCGCCGAACAAGTTCCTGGCCAAGATCGCCAGCGACTGGCGCAAGCCGGACGGGCTGTTCGTGATTACCCCGGA GCAGGTCGACGGGTTCGTCGCCGAGTTGCCGGTGGCCAAGTTGCATGGCGTCGGCAAGGTCACGGCGGAGCGCCTGGCGCGGATGGGCATCCGCACCTGC GCCGACCTGCGCCAGGGCAGCAAGCTGAGTCTGGTGCGCGAGTTCGGCAGCTTCGGCGAACGCCTGTGGGGGTTGGCCCATGGTATCGACGAGCGACCGG TGGAAGTCGACAGCCGGCGCCAGTCGGTGAGCGTTGAATGTACCTTCGATCGCGACCTGCCGGACCTGGCGGCTTGCCTGGAGGAACTGCCGACCCTGCT CGAGGAGCTGGACGGACGCCTGCAACGCCTGGATGGCAGTTATCGGCCGGACAAGCCGTTCGTTAAACTGAAGTTTCACGATTTCACCCAGACCACGGTG GAACAGTCCGGCGCCGGGCGCGACCTGGAGAGCTACCGGCAATTGCTCGGCCAGGCCTTTGCCCGTGGCAATCGTCCGGTGCGCCTGATCGGCGTCGGCG TGCGCCTGCTCGACCTGCAGGGCGCCCACGAACAACTCAGGCTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCTCCTCATGGCGTCAACGAAGTCGCGAGGTTCCGCGGCGACGGCTCTTCCCCTACCGGCAAGGCGCTGAAGCGGCCGAGATCCTGCAGCAGTTCCAGG CGTGCTGCACGGAGTGGGCCGCGTATGGCTTCCTGTTGTTCCACGTCGAGCGGGCGGTCGTCGCCATCGCTCACCGGACCGTGGTGACGGTCCGCGCCAC GCAGTGGGAAGCTCACCTTGAAGCCTTCGCCCAGGTAGGCGATGCGCGTGGTATCGGCGCTCACCGCATAGTCGCGATGGTAGTCCGCTGCGAGCAGGTC CTGTCCCAGCGAGTAGTCGCGGGGCGGATTGCGTACGCCCAGCAGCGGCAGGAGCGTTGCGGGCAGGTCGATGTGGCTGGTGATGCCGCGGACGGCACGG GGCGCCTGTCCGGGAATGCTCAGCACGGCGACGGTGCCGGTCTGGTAGCGATTGAACTCGGTATTGTGGCCCCAGCGCGAGCGTTCCATGAACTCTTCCC
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| Amino Acid Sequence |
>DNA polymerase IV
MRKIIHIDCDCFYAALEMRDDPSLRGKALAVGGSPDKRGVVATCSYEARAYGVRSAMAMRTALKLCPDLLVVRPRFDVYRAVSKQIHAIFRDYTDLIEPL SLDEAYLDVSASPHFAGSATRIAQDIRRRVAEELRITVSAGVAPNKFLAKIASDWRKPDGLFVITPEQVDGFVAELPVAKLHGVGKVTAERLARMGIRTC ADLRQGSKLSLVREFGSFGERLWGLAHGIDERPVEVDSRRQSVSVECTFDRDLPDLAACLEELPTLLEELDGRLQRLDGSYRPDKPFVKLKFHDFTQTTV EQSGAGRDLESYRQLLGQAFARGNRPVRLIGVGVRLLDLQGAHEQLRLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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