Pseudomonas stutzeri A1501, PST_2808 (ruvB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTGCCAGCGGTCGGCGAGCCGGTGACTCTGCACACCCATCTGGTGGTGCGTGAAGACGCGCAGCTACTTTATGGGTTCGCCGAGAAACGCGAGCGCGA GCTATTTCGCGAGCTGATCCGGCTGAACGGCGTGGGACCCAAGTTGGCTTTGGCGCTCATGTCGGGGCTGGAGGTCGATGAGCTGGTGCGGTGCGTTCAG GCGCAGGATACCTCGGTGCTGGTGCGCATACCTGGTGTCGGCAAGAAGACCGCCGAACGACTGCTGGTTGAGCTGAAGGATCGCTTCAAGGCGTGGGAAA GCATGCCGGCCATCGCAACCCTGGTAGTTGAACCTGGCAGCAAAACGGCAGTCACAAGCGCCGAGAATGATGCGGTCAGCGCTTTGATTTCCCTGGGCTT CAAGCCACAGGAGGCCAGCCGGGCAGTGTCCGCCATACAGGAAGAGAATTTGAGCAGTGAAGAGATGATTCGCCGCGCCCTCAAGGGCATGGTGTAAACC
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| DNA Sequence for Gene |
>PST_2808
|ruvB
ATGATCGAAGCGGATCGTATCGTCACGGCCAGCAGTCGCGATCGCGACGAGCAGTTGGATCGCGCCATTCGCCCCCTGAAGCTCGCGGAGTACATTGGCC AGCCGGTTGTGCGCGAGCAGATGGATCTATTCATCCGCGCCGCGAAAGGGCGCCAGGAAGCGCTCGACCATACTCTGATCTTCGGTCCGCCCGGGTTGGG CAAGACCACCCTGGCGAACATCATTGCCGAAGAAATGGGCGTGTCGATCAAGAGTACTTCTGGTCCTGTCCTCGAGCGGCCGGGCGACCTGGCCGCTTTG CTGACCAACCTGGAAGCCGGCGACGTGCTGTTCGTCGACGAGATCCATCGCCTCTCGCCGATCGTCGAGGAGGTGCTGTATCCGGCGATGGAGGACTTCC AGCTCGATATCATGATCGGCGAAGGGCCGGCGGCGCGTTCGATCAAGCTCGATCTGCCGCCGTTCACCCTGGTCGGCGCCACGACGCGTGCCGGCATGCT GACCAATCCACTACGCGACCGCTTCGGTATCGTCCAGCGTCTGGAGTTCTACTCCACCGAGGATCTGGCCACGATCGTCAGGCGGTCGGCCGGAATCCTC GGGCTGCCAACCGAACCCGAGGGCGCGTTTGAGATCGCCCGTCGCGCGCGCGGCACGCCGCGCATCGCCAATCGTCTGCTGCGCCGGGTTCGTGACTTCG CCCAAGTGCGCGGCAAGGGTGAGATCACCCGGCAGATCGCTGACCTTGCGCTGAACATGCTGGATGTCGATGAGCGCGGGTTCGATCATCAGGATCGTCG CCTGCTGCTGACGCTGATCGAGAAGTTCGATGGTGGCCCGGTGGGCATCGACAGTCTTGCCGCGGCGATCAGCGAGGAGCGCCACACCATCGAGGACGTG CTCGAGCCGTACCTGATCCAGCAAGGCTACATCATGCGTACGCCGCGTGGTCGCGTAGTGACGCGCCATGCCTATCTGCACTTCGGCCTCAACTTGCCCA AACGCATGAACGAGCCGCCGACGCCGGACCTGTTCGAAGGCGACATAGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAAAATATTGTTCTGTTACCCGATTGGCATTTGCAGGGCCGAGCACTAGTATGCGCGCGCAAGCCGGAGCTGAAATCTTCACCCACCGCTGTCGAGTCT ATTACGAGGACACCGATGCGGGTGGCATCGTCTATTACGTCAACTACCTCAAATTCATGGAGCGAGCTCGTACCGAGCGGTTGCGCAGCCTGGGATTCGC CCAGTCGCAGCTAGCCGGTGAGGACTTGCTGTTCGTCGTGCATTCGGTCGAAGCGCGTTATCGAGCCCCGGCGCGCCTGGATGACGAGCTGCTGGTGACC GCCGAGGTGGTCGAGCTCAATCGTGCCAGCCTGCGTTTCCGTCAGCAGGTGCGGCGTGCGGTCGATGACGTTCTGCTGTGTGAAGGGCAGGTCCTCGTGG CCTGCGTACGTGCCGAAAGTTTGAAACCCCGAGCCATTCCCGAAGCGCTGCGTGATGCCTTCGCTGGCTTGGGTCTATCCCCTGCAGGAGAGTAAGCGTG
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| Amino Acid Sequence |
>Holliday junction DNA helicase RuvB
MIEADRIVTASSRDRDEQLDRAIRPLKLAEYIGQPVVREQMDLFIRAAKGRQEALDHTLIFGPPGLGKTTLANIIAEEMGVSIKSTSGPVLERPGDLAAL LTNLEAGDVLFVDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYSTEDLATIVRRSAGIL GLPTEPEGAFEIARRARGTPRIANRLLRRVRDFAQVRGKGEITRQIADLALNMLDVDERGFDHQDRRLLLTLIEKFDGGPVGIDSLAAAISEERHTIEDV LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNLPKRMNEPPTPDLFEGDIV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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