Pseudomonas aeruginosa AZPAE14352, NQ48_RS23290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCAACGTGGTGGCCGATCCGCCGAAGAAGCCGGACAGCAAGTACGGCAGCCGCCCCATCTGATTTCGCGTCATCCCAAGGCCCGCCACCCGTGAGGGA GTGGCGGGCCTTGTGCTATGGCGCCTGCTATCTTGGCGGGCATCTCGCCCCGCCGCATCCCGGTTGGCGAGCCGATCTTTCGCCTGTTCAGGCACGGCTG GCGACGGGCCAAGGCCTTTTCCTTTCCGGTGGCAGCGCTACCGTTCCACATCGTCAACCGAAGCTGCTTGCCATCCAGGCGCTCCAAGCGGCGTCCGGGG CCGATCCTGCACTTGCCGGAGAGCGAGCTGTAGAGCTTGCTTAAGAATTTTCCTAGCGATTCTTAGGTGGATTCGCGGAGCCGTGTAGGTCCTGTCTTAT GGCTCTTTTCCAGGCGTTCTGAAAAGATTCGCCACCCATCAAGTTCGCGCCGGTTCCGCCGGATTTTCCCGGACATGCCGGACACATCGGTTGTCATCCC
DNA Sequence for Gene
>NQ48_RS23290
ATGGAGTTCAAGACGTTCCGTCGAACCCTGCTGATCGCGGCAGTCCTGTTCGTTCCCGCCGGCACCAGCATGGCTGCCAATCTGTACGCTTTTGGCGGCC GCGATATCGCCGTCCCCTCGATCCTTCCCGAGGGAAACGTCACGTCGCGCTACACGTTCACTCCCATGCAACTGTGCGGCAAGCCCAGCTGCGATCTCAT CGGCGTCGCTCTGTACAACAAGGGAAGTGTCTGGGACCCGGTCGATGGTCCGGACCTGAATACCAACGTGCCGGGCCTTTCGGCGCGCCTGCTGCTGGAT GGCATACCGGCGAGCAGCCGTTTCAAGGGCACTTTCTCGCAAATCGCGGAGGTCCAGTTGTTCCGCAACTCGACGCCGCTCTCCGACGGCCAGTTCGCGA GCGGAGCGTTCAACTCGTACTTCCTCATTACCTACAAGGACGGGCTTGTCGCGTCTGGCACCTCTTCCGTCAGGTTGACCGGGAGCGTCACCACGATCAA TGCGACCTGCCAGGTCGCCGACCAGACCGTGAAGCTGCAGTCGATCGCTGCCGCCCGGCTGAACGGCGTCGGCACCTACGCGGCCGTTACCCCGTTCAAT CTCGTAGTGGCCGGCTGTCCTCGCGGGTACAACCGCGTCGGCTACAGCCTTCAAGCGGTGGGGGGCGCGGTGGCCGAAGGCTCGGGTGTGCTGGCGCGCC TGGCGGGCAGCACCGCGACCGGCGTATCGATCCGGGTCACCGACGAGGCCGGCGTGCCGCTACGGATGGGACTCTCGTTGCCGGTGACCGCGTACGACAA GAACACCGGCGGGGCGTACTGGATCCCGATGAAAGCGTCCTATGTGCAGACCGCCGAGAAAATCACGCCCGGCTCGGTCCTGGCCGCGATGGTGATCCTG CTCGACTACCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGGGAGGGCAAGAGCGCGCCTCACCCGAACGCCTCGAAGAACGCCAGGGCCCGCGGGTCGCTGGCATAGGCGATGTTGATACGCAGCCAGTCGCTC TCCTCGCCTTCCGGGCTGAAGCCGCTGCCCGGCGACAGCAGCACGTCCAGGCGTGTCGCCACGGCCTGCAATTCGGCGAACGGGTAGTCGCCGATACGGG CCCAGACGAACATCCCGCCGACCGGTTCGGCGAACACCTCCCAGCCGTTGTCCCCAAGCACCCGCAGGGTCGCCGCCATCTGCCGGGTCAGGCGCTGGCG CAGGCGTTGCACCAGCTTGCGGTAACTGCCGTTGGCGAGCATGGTCGAGACCACGCATTCGGCGAAGCGCTGGCTGCCGATGCTGGTGTACATCTTCACA TCCGCCAGGCGCCGGATCAGCTCGGGGCCGGCGATCAGGTAGCCGACCCGTAGCGAGCAACTGAGGGTCTTCGAAAAGCTCGCCAGGTAGATCACCCGGC
Amino Acid Sequence
>fimbrial protein
MEFKTFRRTLLIAAVLFVPAGTSMAANLYAFGGRDIAVPSILPEGNVTSRYTFTPMQLCGKPSCDLIGVALYNKGSVWDPVDGPDLNTNVPGLSARLLLD GIPASSRFKGTFSQIAEVQLFRNSTPLSDGQFASGAFNSYFLITYKDGLVASGTSSVRLTGSVTTINATCQVADQTVKLQSIAAARLNGVGTYAAVTPFN LVVAGCPRGYNRVGYSLQAVGGAVAEGSGVLARLAGSTATGVSIRVTDEAGVPLRMGLSLPVTAYDKNTGGAYWIPMKASYVQTAEKITPGSVLAAMVIL LDYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site