Pseudomonas entomophila L48, PSEEN3174
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTCATGGGAAGTGGAAGCCGGGGTGCAGGCTTGAAGCAGGGCTGCACAGACGGCAACAAGGAGAATGTTGTGTTTCATGGTTTTGCTCTTTCAGCCTT GAAAAGTGATAGCTGCGGCCTCTGTACAGAGGATGCGCGCGCGGGTAAACCGGGAAATCGGGGCCGTTATGGAAGGGGCCCGCGACGTTGATCCTACCCG GCCCGCACGTCGAACCGGGCGACCTCAGTCGTTATCGATGGCAAACAGACAGCATCCATTACGTTCAGTTTCTGGGAGTTGGGTATATGGCGACCTGGGA GTGTTGCCAAATCTTACAAGGTGGGCCTCAGGCGCGCGTTGCAAGTCGTTGAATCAAATAAGTACGGGCAGTGCGCTTACGCGCGTGGGCGTCAATCGCT GCTCCAGCGACGCGGTAAATCGGCCTTGAGCATCCTGTGCAACCTTCGATACTTCGCAGCGCCATCTGGCACTTTGAACTCATGCAACGAGGGAAGGACG
|
|
| DNA Sequence for Gene |
>PSEEN3174
ATGACGATCAAGGAAGAGCTGGGCCAGCCTCAAAGCCATTCGATCGAACTGGACGAGGTGAGCAAGGAGGCCGCAAGTACGCGGGCCGCGTTGACTTCCA ACCTGTCTGGCCGCTTCGACCAGTACCCGACCAAGAAGGGCGACTTTGCGATCGATGGTTATTTGCTGGACTACAGCTCACCCAAGCAAGGTTGCTGGGT GGACGGTATCACTGTCTATGGCGATATCTACATCGGCAAGCAGAACTGGGGCACTTATACCCGCCCGGTGTTTGCCTACCTACAGTATGTGGAAACCATC TCCATTCCACAGAATGTGACGACCACCCTCAGCTATCAGCTGACCAAGGGGCATACCCGTTCCTTCGAGACCAGTGTCAACGCCAAGTACAGCGTTGGCG CCAACATAGATATCGTCAACGTGGGTTCGGAGATTTCCACCGGGTTTACCCGCAGCGAGTCCTGGTCCACCACGCAGTCGTTCACCGATACCACCGAGAT GAAGGGGCCAGGGACGTTCGTCATTTACCAGGTCGTGCTGGTGTATGCGCACAACGCCACCTCGGCAGGGCGGCAGAATGCCAATGCCTTCGCCTACAGC AAAACCCAGGCAGTGGGCTCGCGGGTGGACTTGTACTACTTGTCGGCCATTACCCAGCGCAAGCGGGTCATCGTTCCGTCGAGCAATGCCGTCACGCCGC TGGACTGGGATACGGTGCAACGCAACGTGCTGATGGAAAACTACAACCCAGGCAGTAACAGCGGACACTTCAGCTTCGACTGGAGTGCCTACAACGATCC TCATCGCCGTTATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCTGGTCCATCGCTTATCATGAAGCGCTTGATGAAAGCCTAGGCCATGCCTGAACCTCCTGTCTGCGCGGGGTCAAACCTGAGCAAGGCCTGACTTTGC CAGGCAGGAGGTATTCAGATGAAACGAACGACCGCTTGGGCCGTTGCAGTGTGTGGTGTGTTGCTGCTCAGTGGCTGCTGGCCTTACTGGCACGATGGCG GGCATCACCGGCATTACTACGATGGCGATCATCATGGCCAGGAGTACCGTCGGTACTGACCCCGAAAAGTCTCAGAATGTCGTCACTATCGCGAGGGCCA GCTGATCATCCGTCATGGGCGCAGGGTCGTAGGCTGCGTGATAGTAACGAACGGCCTGCTCGAACTGCGCCCCGCGGATCTTGCCCCCTGAGCCAATGAA GGTGAGTGCATCGTCCTTGGCGGGCTTGAAGTTGTCCTTCGCCATTTCGGAAAGTCCGGTGGTGGCGGTAAAGGGTGTGAAAGGGAGGATGGTGATCAGT
|
|
| Amino Acid Sequence |
>monalysin
MTIKEELGQPQSHSIELDEVSKEAASTRAALTSNLSGRFDQYPTKKGDFAIDGYLLDYSSPKQGCWVDGITVYGDIYIGKQNWGTYTRPVFAYLQYVETI SIPQNVTTTLSYQLTKGHTRSFETSVNAKYSVGANIDIVNVGSEISTGFTRSESWSTTQSFTDTTEMKGPGTFVIYQVVLVYAHNATSAGRQNANAFAYS KTQAVGSRVDLYYLSAITQRKRVIVPSSNAVTPLDWDTVQRNVLMENYNPGSNSGHFSFDWSAYNDPHRRY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|