Pseudomonas aeruginosa AZPAE14373, NQ52_RS26485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_24, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGCGCCGCTGCGAGTGCGTCGGTTGGCGGCCTGGTCGGCAGCAACGCCGGTTCGATCCTGTCGGCGCGCAGCAGCAGTACTGTCAGTGGCGGCGGGCG CAGCCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGACGCATCGTTTCGTCCATGTCGGAAGGCACCGTCAGCGGCGACTACTACGTCTCCATG GGCGGGCTGGCCGGCGTCAACCTGGGATCGATCGAGTACTCCGGCGTCAGCGGCAAGATCGACTTCAAGCCTCAGTCCCATTACGGCCAGATCTACGGCG CGCAGGTCGGCGAGAACCGTGGGGTCCTGGGCGGCAACTACGTGATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTA AGGCCGGCAGGGGAGGTCCCAGGCGGACCTCCCTTCCCGGCCGGGGCCGCTCTCGCCTGGAGTGTGGCCCTCTTCCGCAGGCGCAATCTTGGAGAGTTCC
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| DNA Sequence for Gene |
>NQ52_RS26485
ATGAGCATGAGGTTATTTCCTGGCCGCGTTTCCCTGCGCCGTCGGCCTGGCGCGCAGGCTCGGCAGGCGCTCTTTCTCGGCCTCTGCTGCCTGACCGGCG GCCAGGCCTGGGCCCTGAACGAGGCCGCCCTGAACTGCTCGTTCGGCAATGGCAAAGGCTTGCCCTGGCGTGTGGTGAACGAGCTGACCAGCGGCACGGC GAAAGGCTCGGTGCTGTTCGCCAGGCCGGTGAGCCTGTTCCTGAACTACAAGCCCCAGGCTTCCCAGGAGGCGCATGAGCTGATCCTCGGGGGGAACTGG TCCGGGGTGGGCTATCCGGGGCCCTACGGCACGGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGATGCCCAGGACGGCGTCAAGCGGG TGATTCCGGTCGACAACCAGCCCCATGCGCTGGACAAGCGAGTCACGAGCTTTTCCGGCAGCACGACCAGCGACTACCTGCAGGAACTGGTCCTGACGGT CGATCCCAGCGAGTTGCCTGCCGGCGACCTGAAGGTAACCAGCGTATCCGGCAGCGCCACCCTGAATCTCTGGGCGGTGGACAGGCTGAAGGGCGAAGCG TCCCTCGGCAGCGTCCTGGCGGTGCCTGCGGATAACTTCCCCACCGGGGTTTGCCGAAAGCCCTATTCGCTGATCGGCCCGGCCTCCATCGGGATCGGCG GCGGTCCCCCGCCGCCGCCGATCCCGAAGAAATGCAAGGTCGAGGTGGGACGGGAAATCAACGTCAAACTGGGTAGCGTCGCGTTGAAGAACTTCCCGCG GGTCAACGACACCTCCACGGAGCGCTCCTTCGATATCTCTCTCAGCGAGTGTGCGGCGCTGGCCAAGCCGGAAATCGCTTTTCGCGACAAGTATGTCTCG GCGCAGCAAGCGGACCCGACGATCCTCAGCTTGAAGAGCGGCGGCGCGGCGGGGTTCGGCATCGTCGTGAAGAACGGCCTGGACCAGCAGCGGATACGTT TCGACGGTACGCCCTACCCGATGCGGCGTGTCGGCGACAGCGCCGACCTCCCGCTGAGTGCCGCCTACATCCGTATCGGCGCGGAGGGCGAATTGAAGGC CGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGTCCCGCCTCGGGAAGCGCCGTCGGCCGCCTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTC CAGTGGTTGCAGATCGCCGACGGCGCTCTGCATATCGCTCCGCTGCCCGTCCTGGGCCTCGTGCGCACATGCCATTCCCCCACGCGGAATACCGATATTG CGTATGGGCGAAGGCTTTCTGAGGGATATGCAAGTTTCCTCGGTAGGATTTCGCGCAAATAAACGAACGTTATTTTCCAGGCGATAGTTTCAGCTTGTCG CGGAACTCTTTTTTCAAACTTTTTGCTGCTCTGGCTTGTCCTTTTCGTATTTCATAATTTTTCATAAGTGTCTGCGTAGACGTTTTTCGGGGGCTGTTTC AAGTGTCTTTGTTGTTAGTTTACGAGGCGAAAAAATAGTAGTTTTACTATATTAAATATCGTCGGTTTCACTAGAAAATACACATGTTCACTTTGAACCG
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| Amino Acid Sequence |
>fimbrial protein
MSMRLFPGRVSLRRRPGAQARQALFLGLCCLTGGQAWALNEAALNCSFGNGKGLPWRVVNELTSGTAKGSVLFARPVSLFLNYKPQASQEAHELILGGNW SGVGYPGPYGTVASDVKGIGYRISVDAQDGVKRVIPVDNQPHALDKRVTSFSGSTTSDYLQELVLTVDPSELPAGDLKVTSVSGSATLNLWAVDRLKGEA SLGSVLAVPADNFPTGVCRKPYSLIGPASIGIGGGPPPPPIPKKCKVEVGREINVKLGSVALKNFPRVNDTSTERSFDISLSECAALAKPEIAFRDKYVS AQQADPTILSLKSGGAAGFGIVVKNGLDQQRIRFDGTPYPMRRVGDSADLPLSAAYIRIGAEGELKAGVADGAAEFTFTFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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