Strain | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGGACAACCAGTACCTGCTGGAGGCGCCGGCCTACCGCGCCGCCAACCGCAGTTTCAAGGACGTGTCCGAGCTGCGCCTGCTGAAATTGTCGGAAGCCG ACTATCGACGCCTGCTGCCGTTCGTCAGCGCCTTGCCCGAAGATGCGCCGCTGAACGTGAACACTGCCAGCGTGCCGGTGCTGGCCGCCATGTTCGAGAT CGATCCGGGACAGGCGGAAAACATCGTGGCGGCCCGTGGGCGAGAAGGCTTCCAGGAGAAGACTGAGTTCAGCAAGCACCTGAACGAGTTGGGATCAAAG GCAAGTAACGTCAACTTTGCCGTCGGCACCCGCTACTTCCAGGTGATCAGCGAGGTCAGCCTGGGCGACCGCCGGCAGGTGCTGGTGAGTACCTTGCAGC GGGGCAAGGACGGCAAGATACGCGTGATGGCCCGCGACATGGGGCAGGGCGGCCTGCCCATCCCGTCGACGGGCGGCGACGATTGGAAGAAGGACGAGCG
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DNA Sequence for Gene |
>NQ63_RS24985
ATGAGTGGAGTGAGTGCGCTGTTCCTGCCGCCCGCCAGCACGGCGGGGGCCGATGGGGAACTGGCGGTATGGTGGGTGCAGGATGGCGAGTGCCGGCGCG CGCCGTTCGCCCAGGCGCTGGCGGAGATCCGCGCGCCCTGGCGGCTGTACCTGCCGGTGGAGGCGGTGACCGCCTGCGCGGTGAACCTGCCTACACAGAA GGCGCGCTGGTTGCGCCAGTCGCTGCCGTTCGCGGTGGAGGAACAACTGGCCGACGATGTCGAGCAGATGCACCTTGCCCTTGGTCCGGCGCTGGCCGAC GGCCGCCACCGGGTATTCGCCGTGCAGCGCACCTGGCTCGCCGCCTGGCTGGCGCTGGCCGAGGGCGCGGGCAAGGCGCCGGCTTCGCTGCATGTCGATG CCGATTGCCTGCCGGGCGAGGGCAGTTGCCTGTTCTGGCTGGAAGAGCGCTGGTTGCTCGGCGGCAGCGGCGCAGTACGCCTGGCCTGCGGCAGCGAGGA TTGGCCGGTACTGCGCGACAGTTGCCCGCCGCCGCAGCGGGCCTTCGCCGCGCAGGAGGTGGCGCCCCTGGAGGGGGTGGAAGTCCAGGCCCTGGCGGGC AATCCGCACGTCTGGCTGAGCGAGCAGCCGCTGGGCACCGACCTGGCCCAGGCCGAGTTCGCCGCGCGCCAGCAGAGCAGCCAGTGGCGCCGCTGGCGGC CGCTGCTGGGGTTGGTCGGGCTGTGGCTGGTATTGCAATGGGGCTTCACCCTGGTCCAGGCCTGGCAGTTGCAGCGCGAAGGCGACCGCTACGCGGCGCA GAGCGCAGAACTCTACCGCCAGTTGTTTCCCGAGGACCGCAAGCTGATCAACCTGCGCGCGCAGTTCGACCAGCACCTGGCCGACAGCGCCAGCAGCGGC GGCGAGGGCCAGTTGCTCGGCCTGCTTGGCCAGGCCGCCACGGTGATCGGCGGCGAGCCGACGGTGAGCGTCGAGCAACTGGACTTCAGCGCCGCTCGCG GCGACGTCGCCCTCCAGGTGCGGGCTCCCGGTTTCGACGTGCTGGAACGGCTGCGTTCGCGTCTCAGCGAGTCCGGGCTGGCGGTGCAGCTGGGTTCGGC CAGCCGCGATGGCTCGACGGTCAGCGCGCGCCTGGTGATAGGAGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAAGGTGATGACGCAATTCCACGAGCGCCTCAGGGCCCAGGCGGAAACCTCGCAGCTGGCGATCCGCTGGCGCGGGCTGCCGGCGCGGGACCGCCTG GCGCTGCTCTGGCTCGGCGCGTTCCTCCTGCTGGTGATGCTCTACCTGGCGCTGTGGCGCCCGGCCGAGCGCCATTTGCAGTCGGCGCGGCAGTACTTCA CCGAACAGCGCGCGCTGCATGCCTACATCCAGCAGCAGGCGCCCAACGTGCGCCAGGCCGATGCCGCGGCGCCGCAGGCGCAGATCGACCCGGCGGCGCT GCAGGGCATGGTCACGGCTTCGGCGGCCCAGGCCGGACTGAGTGTCGAGCGCCTCGACAACGAAGGCGAGGGCGCCGTGCAGGTGGCCCTGCAGCCGGCG CCATTCGCCAAGCTGCTGCCCTGGCTGGAGCAGTTGAACGGGCAGGGCGTGCAGGTGGCGGAGGCCGGCCTGGACCGCCAGGTCGACGGCCGGGTCTCGG
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Amino Acid Sequence |
>general secretion pathway protein L
MSGVSALFLPPASTAGADGELAVWWVQDGECRRAPFAQALAEIRAPWRLYLPVEAVTACAVNLPTQKARWLRQSLPFAVEEQLADDVEQMHLALGPALAD GRHRVFAVQRTWLAAWLALAEGAGKAPASLHVDADCLPGEGSCLFWLEERWLLGGSGAVRLACGSEDWPVLRDSCPPPQRAFAAQEVAPLEGVEVQALAG NPHVWLSEQPLGTDLAQAEFAARQQSSQWRRWRPLLGLVGLWLVLQWGFTLVQAWQLQREGDRYAAQSAELYRQLFPEDRKLINLRAQFDQHLADSASSG GEGQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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