Strain | Pseudomonas aeruginosa strain AZPAE14443 AZPAE14443_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCTCGGTGGCGCAACTGGAACGTCACTGCAAGCGCATCTTCCAGCTCACCCCACGGCAGATGATCCACAAGGCGCGGCTCGGCGCCGCCTCGCAACTGC TCGCCGGCGACGCGCCGATCACCGAGATCGCCCTGCGCTGCGGCTACACCGACCACAGCGCCTTCAGCCGCCAGTTCAAGGCGCTCACCGGACTCTCGCC GAGCCAGTACCGCGAGACCCATCGCCAGCCCCGAAAAGCGTAACGCCTCGCCCCGCCACGGGGCGGCGGTAGCAATCCTGCTCCCTTTTGTAACACCGCC GGCCGCGCCCGAGCGGGGCGCAATCCGGCGCGGCCTGGCACAGCGACGCGCCAGCCAAAGCGGTCGCGCTCCAGCGAAAGGTTTTTTATCGCCGTCGGAC GAGGTTCTGGCACAGCCATTGCTCACTTAAAATATCGTATACGAAATCACAAATACGGGATTTGCCGCCCTCCCACTCAACCGCATCGCCAGAGGCCCCC
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DNA Sequence for Gene |
>NQ69_RS01200
ATGAATACCAAGAAGACCCTTGCCCTAGCCCTCACCGCTGCCCTGGGCTGTTCCCTCGCCGGTCTCGCCCAGGCCGACAAGCTCGACGACATCATCGAGT CCGGCAAGCTGCGCTGCGCCGTCACCCTGGACTTTCCGCCGATGGGCTCGCGCGATGCACAGAACAACCCGGTGGGCTTCGACGTCGATTACTGCAACGA CCTGGCGAAGGCCCTGGACGTCAAGGCGGAGATCGTCGAGACGCCCTTTCCCGACCGCATCCCGGCGCTGGTGTCGGGTCGCGCCGACGTGATCGTCGCA TCCACCTCGGACACCCTGGAGCGGGCCAAGACCATCGGCATGAGCATCCCCTACTTCGCCTTCGTCAAGGTGGTACTGACCCGCGAGGACACCGGCATCG CCAGCTACGAGGACCTCAAGGGCCGCCCGGTCGGCGGCACCGCCGGCACCTTCGAGGCGCTGGCCCTGGAGAAGGACAGCAAGGCCTGGGGCGACGCCAA GGGCAGCTTCCGCGCCTACCAGTCCGAGGCCGACACCGCCCTGGCGATCAGCCAGGGGCATATCGACGCCACGGTCGTCTCTTCCACCGTCGCCGCCTCG TGGATCAAGTCGGGCAAGTACAAGGGCCTGAAGATCGCCGGCGACGCGCCCTATGACATCGACTACGTGGCCCTCGGCGCCAAGCGCAACGAATACGGCC TGCTCAACTACCTGAACCTGTTCATCAACCAGCAGGTGCGCACCGGCCGCTACGCCGAGCTGGCGCAGAAATGGGTCGGCGGCACGGCGCCGGAGCTGAC CACCAGCGCGGTCTACCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCCGAGGGCGCGGTCCGCCGCCGGGCCACGCCGTTTCCCCCCGTCCTGGATGCGCCGATGAAGCACGCACACCTCATCGTTCCCCGTACCCTGGTCGCC GGCAGCGCGTCCGGCGAACTGCTGTACGCACCGACCGGCCTGAGCTTCTGGGGCGGCGTCGACCCGCGCAGCGCGGAAGTGATCGACCGTCACCACCCGC TCAGCGGCCGCCATCTACACGGCAGGCTGCTGGCGATTCCCGGTGGGCGCGGCTCCTGTACCGGCAGCAGCGTACTGCTGGAACTGATCCTCGGCGGACG TGCGCCGGCGGCGATCCTCCTGCGCGAACCGGACGAAATCCTCGCCCTCGGCGCGATCGTCGCCGAGGAACTGTTCGGCCGCTCGCTACCCATCGCCTGT CTCGGCGAGCGCTTCGACGAACTCGCCGCCTATCCCTGGGCGCGCCTGGCCGACGGACGCCTGGAACTCCACCGCGATGCCCCGCCGCCGCTGGAGGCCC
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Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MNTKKTLALALTAALGCSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKAEIVETPFPDRIPALVSGRADVIVA STSDTLERAKTIGMSIPYFAFVKVVLTREDTGIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDATVVSSTVAAS WIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAELAQKWVGGTAPELTTSAVYR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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