Pseudomonas aeruginosa AZPAE12145, NQ06_RS11300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGATGGCCTCGGCGGCGAGGACGACCTGGTCGCCCAGGCCCTGGTCGAGATGGGCCTGGCTGCGCCGGAACGGGTGGCGGCGCTCTACGCGGAAGCC GGGCTGCTGCCGATGGGCACCCGCACCCGTGGCCGGGAGGCGTTGCGCGAACGCGTCGAACGACACTTCCGGGTCGACTCCATCGTCTCCCGCCCGGCGG TCCTGCGTGTCGCCGACTCCGCCGAATACCAGCGTTTCCACGCCGCCACCTTCGGCACCTATTTCGCACCGCTGGTGCCGGCGACGCGCCTGGAGGAATT CTTCGTCCGCCTCGGGCGGATCGCCGAGCGGCGCATGCAGGCCGACGGACAGGTCAGCGAAATCCCGGTCAGTGTCTGGCGCTGCCGGGCTCGGGAGGGC GAGGCATAACCTTATGCGCAATTGGTCTGCCGCGCGGCTGAAAATCGGTACGGGCAATTGCACTCGGTGGCATCCGCAACCGATCAAGGATGAACCGACC
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| DNA Sequence for Gene |
>NQ06_RS11300
ATGTCCAACCCGCGTTCGCCACGTCTTCGACTTGTCCCCGTGCTCTGCGCGGTCGGCCTGGCCTGCCTTGGCCAGCCCGGCGAGTCGGCGGCAGAGGAGG TCCGCGCCACCAGCAGCGCCGAGATCCAGCGCTTCGACATCCCGGCCGGCGAACTGGCCCAGGTACTGCTGAGCATAGTCCGCCAGAGTCGCACCCCGAT CGCCTTCGACCAGCACCTGGTGGAGGGCCTGCCGGCACCGGCGATCCAGGGCTCCTACAGCGTCGAGCAGGCGCTGCAGCGGGCCTTGCAGGGCAGCGGC CTGGAATACATCCGCAGCGCCGCCGGCGTGCTCAGCCTGCAACGCGCCACGGCGCCGGATGCCGCGCTGCCGGCGGCGAAGCCCGCCGGGACCCTGGCCA CGGTGGTGGTCACCGGCACCCGCAAGGCCGATGTCAAGGCCGGCGAGAGCCTGGCACCGATCGATGTGGTCAGCGCCGAGCAATTGCGCGACAGTGGCAG CGGCGACCTGCGCGACGCCCTGGTGCGCCTGCTGCCCTCGCTGTCGCGCCAGGCCCAGGCCTACAACGCTTCGGCGCTGACCAACGCGCAGTCGCTGCGC GGCCTGAGTCCCAACCACGTGCTGGTGCTGGTGAACGGCAAGCGCCGTCACGAGACCGCCAACATCAATGTCAGCGGCGGGCTGCAGAGCGGCTCCACCG GGGTCGACCTGGATACCATCCCGCTCGCCGCCATCGAGCGCATCGAGGTGCTGCGCGACGGCGCCTCGGCGCAGTACGGCTCGGACGCCATCGCCGGGGT GATCAACGTCATCCTCAAGTCGGCCGACCACGGCGGCCGGCTCGCCTACGACAACGGTCGCTACGGCGATGGCGACGGCCTGACCCAGAACGGCGGGGTG AATGGCGGCCTGCGTTTCGGCGAGAGCGGTTTCCTCAACCTCAGCGCGCAGTTCCGCGAACAGGCGCGGACCATCCGCGCCGGCATCGACCAGCGTACCG GGCACTACGGCAACCCGTCCATCGGCGACCCTTCGCTGCACCGCCAGGCGCTGGCCTACAACGCCGGCGTGGCGCTGGACGACAACGTCGAGCTGTACAG CTTCGCCACCTATACCCATCGCTCGGTGTCCTCGGCGCAGATCTACCAGTTGCCGTCCCTGGCGCCGCGACTCTATCCGAACGGCTTCACCCCGCGCATC ACCAGCGACGAGGACGACTATTCGCTGACCCTCGGCGCCCGTGGCGGCGAGCTGTTCGGCGCCTGGGACTGGGACCTCAGTTCGACCTACGGTGCCGACC GCCCGGAGATCGGCATGGACCATTCGATCAACCTCGCCCTCTACGGCGAGACCGGCGATTCGCCGCGCTCCTTCGACCTGGCGCGCTACAAGGCCACCCA GTGGACCAACAATCTCGACCTGCGCCGCGACTTCGACCTCGCCTGGCTGCCGGCGCCGCTGAATTTCTCCTGGGGCCTGGAGCAGCGCCGCGAGCTCTAC GAGGTCGAGGCCGGCGATCCCTGGTCCTACTACAACGGCGGTTCCAAGGCACTCCCCGGGCAGGCGCCGGCCACCGCCGGACAGTGGAGCCGCGACGTGC TCGGCGCCTATCTCGACCTGTCCATCGCCCTCGACGAGCGCTGGCAACTGGAGACGGCGGCGCGCTACGAGCACTACAGCGACTTCGGCAGCACCACCAA CGGCAAGCTCGCCAGCCGCTACCGCTTCAGCCCCGAGGTATCGGCGCGGGCCAGTCTCAGCAGCGGCTTCCGCGCGCCGTCGCTGGCCCAGGAGAACTAC ACAAGCCTGGGCGTCTCGCCGACCATCGCCAGCGGCCTGCTGGCGGTCAACTCGCCGGCGGCCAGGCTGCTCGGCGCCGAAGACCTGGAGCCGGAAAAAT CGATCAGCTACAACCTCGGCCTGGTGCTCGATCCCTTGCCGGACCTGAACCTGGCCATCGACGCCTATCGCATCGAGATCCGCGACCGCATCGTCGACGG TGCCACCTATTCCGGACAGCCGGCGATCGATGCGCTGCGCGCCGGCGGGATCAGCATCCCGGCCGGACTGACCCAGGTCAGCACCCACTACATGACCAAC GGCGCCGACACCCGTACCCACGGCCTCGACCTCACCGCCAGCTACCTGACCCGGCTCGGCGAGTGGGGCCGGATCGACTGGCGCCTGGGCGCCAACGTCA ATCGCACGAAGCTGGTCAGGAATCATCGCGGGCGCAACGGCCAGCCGCTGCTCAACGACCAGCAGCAGGCCTGGATCACCAGCTCCACGCCGCGCAGCCA GGTCAGCCTGCAGGCCGACTGGAGCTACCGGCGCTGGGGCCTGACCCTGCGCGAAACGCGCTACAGCAAGACGGTTTCCGAACTGGACTACTACACCGGC GAGCATGCCTATTCGACCACGGTCTTCAACCGCTTCGAGAACTCGCCCAAGTACATCACCGACGTTGCCCTGCGCTATGCGGCGAGCCGCAACCTGACCC TGAGCGCCGGGGCCAACAATCTGTTCGACGTGAAGCCCGACAAGCTGCCGGCCGAGAGCGCCTACCTCGGCTTCAACCAGTACGACACCTATGCCTCGCA GATCAGCTTCAACGGCGCCTTCTACTACCTCGGCGCGGCCTACACCTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGACGAACCATGAGCATCGAACTGCGCGGCGGCGTGCGCGCCTCCGCAGTCATCGGCGACAGTGCCTTCGCCCGCCAGGCCGCGCGTTTCCTGCCGG ACACCCGCAGTCGCGCGGTGAGCGCCTTCGACATCCAGCAGAAGGCCCGCCTGGAAGAGGCGGACGGCCTCGACGGCGCGCTGTTCACCGTTTCCGCTGC CTGGCCCGACCCCTGGCTGGTCGCCGGCTGGGCTTTGGCCGCGGCGCCGCGCCTGCGCGCCACCGTCGCGCACCGACCGGGGAGCGCCCAGCCGACCGTT GCCGCGCGCGCCCTGGCCACTCTCGACGGCCTGTCCAACGGGCGCGCCGGCGTACACCTGGTGATCGGCTCCAGCGACGCCGACGTGCGCCGCGACGGCG ACTTCGCCGACAAGGACGAACGCTACCGGCGCGCCGTGGAGTACCTGGAGGTCTTCACCCGCGCCCTGGAAAGCCGCGAACCCTTCGACTACCACGGCGA
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| Amino Acid Sequence |
>membrane protein
MSNPRSPRLRLVPVLCAVGLACLGQPGESAAEEVRATSSAEIQRFDIPAGELAQVLLSIVRQSRTPIAFDQHLVEGLPAPAIQGSYSVEQALQRALQGSG LEYIRSAAGVLSLQRATAPDAALPAAKPAGTLATVVVTGTRKADVKAGESLAPIDVVSAEQLRDSGSGDLRDALVRLLPSLSRQAQAYNASALTNAQSLR GLSPNHVLVLVNGKRRHETANINVSGGLQSGSTGVDLDTIPLAAIERIEVLRDGASAQYGSDAIAGVINVILKSADHGGRLAYDNGRYGDGDGLTQNGGV NGGLRFGESGFLNLSAQFREQARTIRAGIDQRTGHYGNPSIGDPSLHRQALAYNAGVALDDNVELYSFATYTHRSVSSAQIYQLPSLAPRLYPNGFTPRI TSDEDDYSLTLGARGGELFGAWDWDLSSTYGADRPEIGMDHSINLALYGETGDSPRSFDLARYKATQWTNNLDLRRDFDLAWLPAPLNFSWGLEQRRELY EVEAGDPWSYYNGGSKALPGQAPATAGQWSRDVLGAYLDLSIALDERWQLETAARYEHYSDFGSTTNGKLASRYRFSPEVSARASLSSGFRAPSLAQENY TSLGVSPTIASGLLAVNSPAARLLGAEDLEPEKSISYNLGLVLDPLPDLNLAIDAYRIEIRDRIVDGATYSGQPAIDALRAGGISIPAGLTQVSTHYMTN GADTRTHGLDLTASYLTRLGEWGRIDWRLGANVNRTKLVRNHRGRNGQPLLNDQQQAWITSSTPRSQVSLQADWSYRRWGLTLRETRYSKTVSELDYYTG EHAYSTTVFNRFENSPKYITDVALRYAASRNLTLSAGANNLFDVKPDKLPAESAYLGFNQYDTYASQISFNGAFYYLGAAYTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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