Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TACTGGCTTGGCGCATTCCCAACGCCGAACTGCACGTGATCGACGACGGCCACCTGTTCCTGGTGACCCGCGCCGAATCGGTGGCGCCGATCATCATGAA ATTCCTCGCCGAGGAGCGCCGCCGCGCCGTCATGCACCCTCGCCCGTTCCTGCCCAAGACCGGCTGAACTGCTGCACGGGCAACACCAGGGCAGCAGACA CTGCTTCGTCATGGTGCAGGTGCATAGTCAATGTTCCGCAACGGCGCATGGCGCCTGGCTTCGCCGCGACGGCGCGGGCTCTGCGACGCCCGTCCCGGCG TTGTGGTACAGGGCTTGCTGCCCCAGCTTCGGGCGGCATCCTCCCTGTTCAGGGAGGTGCGCGGTTCTGTCCCGGGTGAAACGGAATCCACAGGCTATAA CTGAGTATTCCGAGCCAGGGCGCGCTGGCGTCCGAGGCATCCATGACGGTGGTCCTACGACGGAGTGTGGTCCATGCGAGAAAAGCAGGATACGGGCAGT
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DNA Sequence for Gene |
>PSPA7_5797
|phaC2
GTGCCGGTGCCCGCCGAGTTCATGAACGCGCAAAGCGCCATCGTCGGCCTGCGCGGCAAAGACCTGCTGACTACGGTCCGCAGCCTGGCGGTCCACGGCC TGCGTCAGCCGCTGCACAGCGCGCGGCACCTGGTCGCCTTCGGCGGCCAGCTGGGCAAGGTGCTGCTGGGCGACACCCTGCACCAGCCGAACCCGCAGGA CGCCCGCTTCCAGGACCCTTCCTGGCGTCTGAATCCCTTCTACCGGCGCACCCTGCAGGCCTACCTGGCCTGGCAGAAGCAACTGCTCGCCTGGATCGAC GAGAGCAACCTGGATTGCGACGACCGCGCCCGCGCGCGCTTCCTCGTGGCCCTGCTGTCCGACGCTGTCGCGCCGAGCAACAGCCTGATCAATCCGCTGG CGCTGAAGGAGCTGTTCAACACAGGCGGGATCAGCCTGCTCAACGGCGTGCGCCATCTGCTCGAGGACCTGCTGCACAACGGCGGCATGCCCAGCCAGGT GAACAGGACCGCCTTCGAGATCGGCCGCAACCTGGCCACCACCCAAGGCGCGGTGGTGTACCGCAGCGAGGTGCTGGAGCTGATCCAGTACAAGCCGCTG GGCGAGCGCCGCTACGCCAGGCCACTGCTGATCGTGCCGCCGCAGATCAACAAGTACTACATCTTCGACCTCTCGCCGGAAAAGAGCTTCATCCAGTACG CCCTGAAGAACAACCTTCAGGTCTTCGTCGTCAGTTGGCGCAACCCCGACGCGCAGCACCGCGAATGGGGTCTTAGCACCTATGTCGAGGCCCTCGACCA GGCCATCGAGGCCTGCCGCGAGATCACCGGCAGCCGCAGCGTGAACCTGGCCGGCGCCTGCGCCGGCGGGCTCACCGTGGCCGCCCTGCTCGGCCACCTG CAGGTGCGCCGGCAACTGCGCAAGGTCGCTAGCGCCACCTACCTGGTCAGCCTGCTCGACAGCCAGGTGGAAAGCCCGGCGATGCTCTTCGCCGACGAGC AGACCCTGGAGAACAGCAAGCGCCGCTCCTACCAGCACGGTGTGCTGGACGGCCGCGACATGGCCAGGGTGTTCGCCTGGATGCGCCCCAACGATCTGAT CTGGAACTACTGGGTCAACAACTATCTGCTCGGCAAGCAGCCGCCGGCGTTCGACATCCTCTACTGGAACAACGACAACACGCGCCTGCCCGCAGCCTTC CACGGGGAGCTGCTGGACCTGTTCAAGCACAACCCGCTGACCCGCCCGGGCGCCCTCGAAGTCGGCGGTACCCCGGTCGACCTGGGCAAGGTGGCGATCG ACAGCTTCCACGTCGCCGGCATCACCGACCACATCACGCCCTGGGACGCGGTCTACCGCTCGGCCCTGCTGCTCGGTGGCGAGCGGCGTTTCATCCTGTC CAACAGCGGGCACATCCAGAGCATCCTCAACCCACCCGGCAACCCCAAGGCCTGCTACTTCCAGAATGACAAGCTGAGCAGCGACCCGCGCGCCTGGTAC TACGACGCCAAGCGCGAGGAAGGCAGCTGGTGGCCGGTCTGGCTCGGCTGGCTGCAGGAGCGCTCGGGCGAGCTGGGCGAGCCCGGCTTCAACCTCGGCA GCGCTGCCCATCCGGTCCTGGAAGCCGCTCCCGGCACCTACGTCCACATACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCTCCCGGGCCGGGCCGCACGAACCCGGAAGAAGCACGGATGAAGACACGCGACCGTATCCTCGAATGCGCGCTGCTGCTGTTCAACGAGCAGGGCGA ACCCAACGTCTCGACCCTGGAGATCGCCAACGAACTGGGCATCAGCCCGGGCAATCTCTACTACCACTTCCACGGCAAGGAGCCGCTGGTGCTGGCGCTG TTCGAGCGCTTCCAGGCGGAGCTGGCGCCGCTGCTCGATCCACCCGAGGAAGTGCGACTGGGCGCGGAGGATTACTGGCTGTTCCTGCACCTGATCGTCG AGCGTCTCGCCCACTACCGCTTCCTGTTCCAGGACCTGTCCAACCTGACCGGACGCCTGCCCCGCCTGGCCCGCGGCACCCGGACCTGGCTCGGCGCCCT GAAGCGAACCCTGGCCACCCTGCTGGCCCGGCTCAAGGCCGATCGCCAGTTGCACAGCGATGCGCCGGCGCTCGACCAACTGGTCGAGCAGATCACCCTG
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Amino Acid Sequence |
>poly(3-hydroxyalkanoic acid) synthase 2
MPVPAEFMNAQSAIVGLRGKDLLTTVRSLAVHGLRQPLHSARHLVAFGGQLGKVLLGDTLHQPNPQDARFQDPSWRLNPFYRRTLQAYLAWQKQLLAWID ESNLDCDDRARARFLVALLSDAVAPSNSLINPLALKELFNTGGISLLNGVRHLLEDLLHNGGMPSQVNRTAFEIGRNLATTQGAVVYRSEVLELIQYKPL GERRYARPLLIVPPQINKYYIFDLSPEKSFIQYALKNNLQVFVVSWRNPDAQHREWGLSTYVEALDQAIEACREITGSRSVNLAGACAGGLTVAALLGHL QVRRQLRKVASATYLVSLLDSQVESPAMLFADEQTLENSKRRSYQHGVLDGRDMARVFAWMRPNDLIWNYWVNNYLLGKQPPAFDILYWNNDNTRLPAAF HGELLDLFKHNPLTRPGALEVGGTPVDLGKVAIDSFHVAGITDHITPWDAVYRSALLLGGERRFILSNSGHIQSILNPPGNPKACYFQNDKLSSDPRAWY YDAKREEGSWWPVWLGWLQERSGELGEPGFNLGSAAHPVLEAAPGTYVHIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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