Pseudomonas aeruginosa PA7, PSPA7_5797 (phaC2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TACTGGCTTGGCGCATTCCCAACGCCGAACTGCACGTGATCGACGACGGCCACCTGTTCCTGGTGACCCGCGCCGAATCGGTGGCGCCGATCATCATGAA ATTCCTCGCCGAGGAGCGCCGCCGCGCCGTCATGCACCCTCGCCCGTTCCTGCCCAAGACCGGCTGAACTGCTGCACGGGCAACACCAGGGCAGCAGACA CTGCTTCGTCATGGTGCAGGTGCATAGTCAATGTTCCGCAACGGCGCATGGCGCCTGGCTTCGCCGCGACGGCGCGGGCTCTGCGACGCCCGTCCCGGCG TTGTGGTACAGGGCTTGCTGCCCCAGCTTCGGGCGGCATCCTCCCTGTTCAGGGAGGTGCGCGGTTCTGTCCCGGGTGAAACGGAATCCACAGGCTATAA CTGAGTATTCCGAGCCAGGGCGCGCTGGCGTCCGAGGCATCCATGACGGTGGTCCTACGACGGAGTGTGGTCCATGCGAGAAAAGCAGGATACGGGCAGT
DNA Sequence for Gene
>PSPA7_5797 |phaC2
GTGCCGGTGCCCGCCGAGTTCATGAACGCGCAAAGCGCCATCGTCGGCCTGCGCGGCAAAGACCTGCTGACTACGGTCCGCAGCCTGGCGGTCCACGGCC TGCGTCAGCCGCTGCACAGCGCGCGGCACCTGGTCGCCTTCGGCGGCCAGCTGGGCAAGGTGCTGCTGGGCGACACCCTGCACCAGCCGAACCCGCAGGA CGCCCGCTTCCAGGACCCTTCCTGGCGTCTGAATCCCTTCTACCGGCGCACCCTGCAGGCCTACCTGGCCTGGCAGAAGCAACTGCTCGCCTGGATCGAC GAGAGCAACCTGGATTGCGACGACCGCGCCCGCGCGCGCTTCCTCGTGGCCCTGCTGTCCGACGCTGTCGCGCCGAGCAACAGCCTGATCAATCCGCTGG CGCTGAAGGAGCTGTTCAACACAGGCGGGATCAGCCTGCTCAACGGCGTGCGCCATCTGCTCGAGGACCTGCTGCACAACGGCGGCATGCCCAGCCAGGT GAACAGGACCGCCTTCGAGATCGGCCGCAACCTGGCCACCACCCAAGGCGCGGTGGTGTACCGCAGCGAGGTGCTGGAGCTGATCCAGTACAAGCCGCTG GGCGAGCGCCGCTACGCCAGGCCACTGCTGATCGTGCCGCCGCAGATCAACAAGTACTACATCTTCGACCTCTCGCCGGAAAAGAGCTTCATCCAGTACG CCCTGAAGAACAACCTTCAGGTCTTCGTCGTCAGTTGGCGCAACCCCGACGCGCAGCACCGCGAATGGGGTCTTAGCACCTATGTCGAGGCCCTCGACCA GGCCATCGAGGCCTGCCGCGAGATCACCGGCAGCCGCAGCGTGAACCTGGCCGGCGCCTGCGCCGGCGGGCTCACCGTGGCCGCCCTGCTCGGCCACCTG CAGGTGCGCCGGCAACTGCGCAAGGTCGCTAGCGCCACCTACCTGGTCAGCCTGCTCGACAGCCAGGTGGAAAGCCCGGCGATGCTCTTCGCCGACGAGC AGACCCTGGAGAACAGCAAGCGCCGCTCCTACCAGCACGGTGTGCTGGACGGCCGCGACATGGCCAGGGTGTTCGCCTGGATGCGCCCCAACGATCTGAT CTGGAACTACTGGGTCAACAACTATCTGCTCGGCAAGCAGCCGCCGGCGTTCGACATCCTCTACTGGAACAACGACAACACGCGCCTGCCCGCAGCCTTC CACGGGGAGCTGCTGGACCTGTTCAAGCACAACCCGCTGACCCGCCCGGGCGCCCTCGAAGTCGGCGGTACCCCGGTCGACCTGGGCAAGGTGGCGATCG ACAGCTTCCACGTCGCCGGCATCACCGACCACATCACGCCCTGGGACGCGGTCTACCGCTCGGCCCTGCTGCTCGGTGGCGAGCGGCGTTTCATCCTGTC CAACAGCGGGCACATCCAGAGCATCCTCAACCCACCCGGCAACCCCAAGGCCTGCTACTTCCAGAATGACAAGCTGAGCAGCGACCCGCGCGCCTGGTAC TACGACGCCAAGCGCGAGGAAGGCAGCTGGTGGCCGGTCTGGCTCGGCTGGCTGCAGGAGCGCTCGGGCGAGCTGGGCGAGCCCGGCTTCAACCTCGGCA GCGCTGCCCATCCGGTCCTGGAAGCCGCTCCCGGCACCTACGTCCACATACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCTCCCGGGCCGGGCCGCACGAACCCGGAAGAAGCACGGATGAAGACACGCGACCGTATCCTCGAATGCGCGCTGCTGCTGTTCAACGAGCAGGGCGA ACCCAACGTCTCGACCCTGGAGATCGCCAACGAACTGGGCATCAGCCCGGGCAATCTCTACTACCACTTCCACGGCAAGGAGCCGCTGGTGCTGGCGCTG TTCGAGCGCTTCCAGGCGGAGCTGGCGCCGCTGCTCGATCCACCCGAGGAAGTGCGACTGGGCGCGGAGGATTACTGGCTGTTCCTGCACCTGATCGTCG AGCGTCTCGCCCACTACCGCTTCCTGTTCCAGGACCTGTCCAACCTGACCGGACGCCTGCCCCGCCTGGCCCGCGGCACCCGGACCTGGCTCGGCGCCCT GAAGCGAACCCTGGCCACCCTGCTGGCCCGGCTCAAGGCCGATCGCCAGTTGCACAGCGATGCGCCGGCGCTCGACCAACTGGTCGAGCAGATCACCCTG
Amino Acid Sequence
>poly(3-hydroxyalkanoic acid) synthase 2
MPVPAEFMNAQSAIVGLRGKDLLTTVRSLAVHGLRQPLHSARHLVAFGGQLGKVLLGDTLHQPNPQDARFQDPSWRLNPFYRRTLQAYLAWQKQLLAWID ESNLDCDDRARARFLVALLSDAVAPSNSLINPLALKELFNTGGISLLNGVRHLLEDLLHNGGMPSQVNRTAFEIGRNLATTQGAVVYRSEVLELIQYKPL GERRYARPLLIVPPQINKYYIFDLSPEKSFIQYALKNNLQVFVVSWRNPDAQHREWGLSTYVEALDQAIEACREITGSRSVNLAGACAGGLTVAALLGHL QVRRQLRKVASATYLVSLLDSQVESPAMLFADEQTLENSKRRSYQHGVLDGRDMARVFAWMRPNDLIWNYWVNNYLLGKQPPAFDILYWNNDNTRLPAAF HGELLDLFKHNPLTRPGALEVGGTPVDLGKVAIDSFHVAGITDHITPWDAVYRSALLLGGERRFILSNSGHIQSILNPPGNPKACYFQNDKLSSDPRAWY YDAKREEGSWWPVWLGWLQERSGELGEPGFNLGSAAHPVLEAAPGTYVHIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site