Pseudomonas aeruginosa PA7, PSPA7_5128
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGAACGAGCCGCCGCCGGTATAGCAGTTGAACAGCGGCGGGAAGACCTTCAACGGCAGCGCGGCGGACATGAACAGCGGGTGGTTCCACAGTCGCTGC AGCATGGCCTCGCCGATTTCCCGCGCCAGCGGGTGGTCCTGCGGCAACTGCAGGTTGTGCTTGGCCTTGGCCGACTGGTAGCCGGCGGTCGCCTTGCCGT CGGCCCACTCCGCCTGTTCCAGGGCGGCGCGGATCCGGGAGACTTCATCGGCGGTGAAGAGGGCGGGGATGTGCAGCAGCATGGCGCTGTCCATGGAGGC GAAATGATTGCCAATGATATTGATTTGCATTGGTGCTGTAAAACCGCCATCCCGGTATAGACGAGCGAAGCGCAGAAAAATGTAATGAGAAAAGTGTAAA AAATGTAAATTCCTGTCGGATGCGAATCTGTAATAATTGATAACAATTCTGATCTGCAATAGATTTCGCGACCTTCACAGCTCCCGGGGAGGGGTTTCGA
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| DNA Sequence for Gene |
>PSPA7_5128
ATGTCGCGTCAGTCCACGGATATCGCCGTTTCGTCGCAGCGCCTGCTGGCTTCGGCCATCGGTGTCGCCATCACTGCCATCGCCACGCCGCAGGCGGCCC ATGCCGAACAGGCCGGGCAGAAAAAGACCGACAAGGACGGCGTTCTGTCGCTGGACGCGGCCACCATCGTCGGTGAGCAGCAGGACGAAACCACCTACAA CGTCGATCGCTCCGCGTCGAAAAAGTACACCGCGCCGCTGCTGGATACGCCACGTTCTGTCACCGTGGTGCCCAAGCAGGTGATCAAGGATACCGCCGCT GTTTCCCTCCAGGACGCGTTGCGTACCGTTCCGGGCATTACCTTTGGCGCGGGCGAAGGCGGTAACCCCACCGGTGACCGACCGTTCATCCGCGGATTCG ATGCGCAGAGCGACACCTATGTCGATGGTGTACGCGACACCGGCGCGCAGACGCGCGAGATCTTCAACCTCGAGCAGATCGAGGTCAGCAAGGGGCCCAA CTCGGCGTTCGGCGGGCGTGGCTCGGCCGGCGGCAGCCTCAATCTCGTGAGCAAGCAGGCCAAGGCGGGGAACTTCATCGATGGTGGCTTCACCTATGGT TCCGACCAGACCCGCCGCTATACCCTGGATCTCAATCAGGAGTTCCTCGATGGCAATGCGGCATTTCGCCTGAATCTTCTCAAGCACGACGCCAATGTCG CCGGCCGCGACGAAGTGGACGTCAGCCGCTGGGGCGTAGCGCCATCGCTTACCTTCGGCCTCGGTTCGCCGACGCGAGTTACCGTCAGCCACTATCACCT GGAAAGTGACGATACGCCCGACTCGGGGATTCCATACGCCAAGAGCGGCAACCGCAGCAAGCACAATCCAGATAAGCCGGTGAATGTCGATCGAGGCAAT TTCTATGGATTGACGGGGCGCGATTTCCAGAAGAGCCGGATCGATACCAGTACCGTCACCATCGAGCATGACCTGACCGACAGTCTCACCATTCGCAACA CCTCGCGTTACGGCAACAGCCATCAGGACTATCTGTGGACGCAGCCGGACGACAGCCAGGGCAACATCAACAATGGCACGGTCTGGCGCCGGCAGAACAA CCGCGTGAGCACCACCACCACGGCAGTCAACCAGACGGACCTGTTCGGAGAGTTCTACCTGGGTGGCTTCAAGAACAGCTTCAGCACCGGCCTCGAGTTC AGCCGCGAAGACAGCAAGCGCGATGGCTATACCGTCGATACCAATACCGGTCTGGGCAACAACAAGTGCAATCCATCGCTGATCGGGGCTCCCAGTGGCT ATAACTGCACCAGCCTGGAAAACCCCAATCCGCATGATCCGTGGAATGGCAGCATCACTCGGAAATATGCGCCGCTGAATACGGTCGGCACCACCAAGGC CATATATGCGTTCGATACCATCGACCTGAACGAGCAATGGCAGGTCAATATCGGTGCCCGCTTCGACAGTTTCGAAACCACGGCGAAGAACCATGGTGTC AGCCCCACTACCAAGCTCAGCGACAAGTCGAGCTTCTGGAACTGGCAGGCAGGCCTGGTGTGGAAGCCTGCACCGAACGGCAGCATCTATGCGTCCTACG CCACCTCGGCGACCCCGCCGGGGAGCATGCTCGACAATGGCGACACCTCGAATGCCGTCGACGGGTTCGCCATCAGCAATAATCTCGAGCCGGAAGAAAC CACCAACTACGAGCTTGGTACCAAGTGGGCCTTCTTCAACGAGCGGCTGGAGTTGAGTGCGGCGATTTTCCGCACGGACAAGGACAACACCCGTATCCTG GTGGCCAACCAGACCTACGACAATGCCGGACAATCCCGCGTCGATGGCGTGGAGCTGAGCGCCAGCGGCAAACTGACCGAGAAGTGGAAGGTGTTCGCAG GCTACAGCTACCTCGACAGCGAGCTGGTTGATGCCGGCAAGGCCGGGCGCAACGGCAACGTCAACGCATCGGCAGTTTCCAGCAATGGCAATGAGATGCC GAACACGCCGAAGAACAGCTTCAGTCTGTGGACCACTTACGACCTCTTCCCGAAAGCAACCATCGGGGGCGGCGCCTTCTATGTCGACAAGGTCTATGGC GATGTCGGCAATACCGTCTATGTCCCCGATTACTGGCGCTACGATGCGATGGCCAGCTACAAGCTGAGCAAGAACGTCGATTTCCAGGTCAATGTGCAGA ACGTGTTCGACAAGAAGTATTTCGACAAGGCCTACGCGGCGCACTATGCGTCCCAGGCTGCCGGAAGGACGGTGTTGTTCTCCACCAACTTCCACTTCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCCGCTTGCGCTTTCCGCGAAAGCCCCACCCCTTCCCGGGGCGGGGCTTTTCCGCATCCGGGGCGGGTAAATAGAGCGTAAAGAACGTTAATTCGGCT TTATCGCAACTGATTATCAAATAGAATTGGCTGCCTGCGATTTCCGTATCGTCCAGCCAGTGCGAAGCACCTGGCCCTGTTCCGTTGTTGCCGCCTGGCG GCCCGTGAAGGTGATCCTGTGAAGAAAGTCTGGTTCCAGTTGCATTGGTTCTTCGGCATCAGCGCCGGCCTGGTGCTGGCGCTGATGGGCGTCACCGGGG CGACGCTGTCGTTCCAGGACGAACTGATGCGCGTCCTCAACCCCGACGTACTGGTGGTGCAGAAGCGCCCCGGGGGCGTGCTGCCGCTGGACGAACTGGT GCATCGCATCGAGAGCGCCGAGCCGGGCCGGAAGGTGGCCTTCGTCTGGGTCGAGATGGACAGCGACAAGGCCGGGCGGATCTTCTACACCCCGCCGCCG
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| Amino Acid Sequence |
>TonB-dependent receptor
MSRQSTDIAVSSQRLLASAIGVAITAIATPQAAHAEQAGQKKTDKDGVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPRSVTVVPKQVIKDTAA VSLQDALRTVPGITFGAGEGGNPTGDRPFIRGFDAQSDTYVDGVRDTGAQTREIFNLEQIEVSKGPNSAFGGRGSAGGSLNLVSKQAKAGNFIDGGFTYG SDQTRRYTLDLNQEFLDGNAAFRLNLLKHDANVAGRDEVDVSRWGVAPSLTFGLGSPTRVTVSHYHLESDDTPDSGIPYAKSGNRSKHNPDKPVNVDRGN FYGLTGRDFQKSRIDTSTVTIEHDLTDSLTIRNTSRYGNSHQDYLWTQPDDSQGNINNGTVWRRQNNRVSTTTTAVNQTDLFGEFYLGGFKNSFSTGLEF SREDSKRDGYTVDTNTGLGNNKCNPSLIGAPSGYNCTSLENPNPHDPWNGSITRKYAPLNTVGTTKAIYAFDTIDLNEQWQVNIGARFDSFETTAKNHGV SPTTKLSDKSSFWNWQAGLVWKPAPNGSIYASYATSATPPGSMLDNGDTSNAVDGFAISNNLEPEETTNYELGTKWAFFNERLELSAAIFRTDKDNTRIL VANQTYDNAGQSRVDGVELSASGKLTEKWKVFAGYSYLDSELVDAGKAGRNGNVNASAVSSNGNEMPNTPKNSFSLWTTYDLFPKATIGGGAFYVDKVYG DVGNTVYVPDYWRYDAMASYKLSKNVDFQVNVQNVFDKKYFDKAYAAHYASQAAGRTVLFSTNFHF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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