Pseudomonas aeruginosa PA7, PSPA7_4830 (gspI1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGTTCCGCCAGCACCTTGAGGCCCTGCGCCTGGCTCGGATAGCGCCCCTGGTCGAGGCGGTAGAGCTTGAGCGCCTGCATCAGTCCGGAAATGTCCTG GCGCGCCGCGGTGGCGCGGGCCTGGTCGGGCCGGTCGAGCACCTTGGGTACCACCATCGCGGCGAGGATGCCGAGGATCACCACCACCACCATGATCTCG ATCAGGGTGAAGCCCCGTTGTCCCCGACGTCCTTTCGGGCTGGAGCTGAACTGCACGATATCCATCTCGACACTCCTCGGCATGGTTCGATTCGCCGCGG ATTGTTTCAGGAAGATATGTCAACGATATTGAAAATCCTCGGGTGCGCACCTCTCCCGCAGGGGCGCGGAAGGCCCTGGAACAGGGCTCTCCGGCAGGTC TTGGAAGGCCCGCCGGGGGAGCCCTCCCGAGCTTTTGTCAGGTATCGGTCAGATTCCCCGGCTAGCCTGGAAGCCCTCCTTTCGCCGACCCGCGATGCCC
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| DNA Sequence for Gene |
>PSPA7_4830
|gspI1
ATGCCCTCTTCTTCCCGCGGTTTCACCCTGATCGAGGTGCTGGTGGCCCTGGCCATCGTCGCCATCGCCCTGGCCGCAGCGATCCGCGCGGTGGGCCTGA TGACCGATGGCAACGGCCTGCTGCGCGACAAGTCGCTGGCCCTGCTGGCGGCGCAAAGCCGTCTCGCCGAACTGCGCCTGGATGGGGCCGTGCGTCCCGG CGAGAGCGATTTCGAATGCTCCCAGGGGCGCCTGCGGCTGTACTGCGAGCAGCGCGTCCAGGCCACCGCCGACCCGGCCCTGCTGTGGGTGGAGATCCGC GTACGCGCGCAGCGCGAACAGGCCGTCCCGCTGGCACGCCTGAATACCCTGCTGAGCCGCGTGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTCAGCCGCGCTTGAGGGTGGCCAGTGGCGGCGGCTCGGCGAGCCGCGGCATGGCTACCCGGCGAACCTCGCCGTTCTGCTCGATGAGCACCGCGTCGG CCTCGATCCGCCGTACCTTCGCCGCACGCCCCAGCGCCTCGCCCTCGCGGTAGGCCTGGAGTGGCGCGCCATTCACCGAAAGGATGGCGATCGCCGCCGG CCCCCCACCGATCAGCCCGGCCAGGGACACCTCGATCTCGCTGGAAGGTGCCGCGAACCAGCGCTGCGCGGGCTCCTCGCTGGACACTGGCGGAGCGGCG CCGACTTCGGCCTGGACCACGCCGGGAATCGGCGCCAACAGCAGGTAGCCCCAGAACAGCAGGCCGGCGAGAAGCGCCAGAACGGCGGCGAGCTGGACCA GGCGGGGCGGGTCGATACGGGGTATGGCCGGCATGGCGGGACACTCCTGGAGAATGAACGGCGGGCACCGCGAACGGCGCCTCGGAACCAGCCTAGCGCC
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| Amino Acid Sequence |
>HxcV putative pseudopilin
MPSSSRGFTLIEVLVALAIVAIALAAAIRAVGLMTDGNGLLRDKSLALLAAQSRLAELRLDGAVRPGESDFECSQGRLRLYCEQRVQATADPALLWVEIR VRAQREQAVPLARLNTLLSRVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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