Pseudomonas fluorescens AU6026, MZ22_RS01965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU6026 Contig_48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGCCATGGCGCGTACTCCCGAAGACCTGTCGAAGAAGTTTCGCTACAACCAGCGGCGTGAACTGCGCCTGTTGGAAGAGGCGGGCGGCTTGGTAAGGG CGGTCAGTGAGTTTTCCAGCGTAGAACTGGCGGCGATCTATTGCGACCTGTTCCAGCGTCGTTGGGGCTTCCCGGCGGCGGGCGCGGCGCGTCTGGCCGA GGTGCTGGAGTTGCTCAAGGAATTCCTGTTCGGCTCGGTGCTGTTTCTGAACGACGCGCCGATTGCAGTGCAATTGGTGTATCAGGTGCAGTCCAACGAA TGGTTCAGTGCCGAGTATGTCAATGGCGGCGTCGACCCTGAAACCCGTGCATTCAGCCCCGGCAGCGTGCTGAGTTTTCTCAATACCCAAAGTGCCTGGG AGCAGGCGCGGGCGGCGAACAAGTCGCTGCGCTTCTCCTTCGGGCGTTCCGACCGTGAATACAAGGAGCGCTGGTGCAACCCGGTGCCGGTGTTCAGTGT
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| DNA Sequence for Gene |
>MZ22_RS01965
ATGAGCCGTAAACAGCAACTGCTCAAGCGCCATCGGCGTAACAAGCGTATTGCGCTATTGATTGGCGTGCTGGTGTTGGTCGCCACCGGCGTACTGGTCG CATGGTGGTTGCCGCTGATCCTTGCGGTGCTGCTGTGGGCCGCCCATGAAGCCTGGTTTGCCGATCACCTGTTTTACTCGCCCAAAGACAGCTATGAGTA CGCGTTCCCGGCCGGCAGCGAACAGCCCGGCTTGCGCCTGGAGGCGGGCCGGCTGTTGCTGGATGCGCCGTTGGCGGCGGATGAAACCCTGATCGTCGGC ATTGAGTTGAAAAGTACCTGGCTGGGGCGTTTCTTCGACCCTGCGGTGGACCTGTTGGGCCTGCAAAGCCCGGACCGGCAAGCCTTCGAGCGCGGCGTCG CTGGGCGGCGTTATCTGAACCTGACCGGCGCCGCCGAAGCCTTGGCCGCGGGCAAGCTCGAATTGCGCGGGCGTTTTTGCCGGATAAAGGGGCAGCCGAC GCTGTGGCGCTTTCGCCAGCCGGACTATCGCCAGCAACGTGTGATGGTGATCGCGCCCCATGCCGACGATGCCGAGCTGGCTGCGTTCAGCCTTTACAGC CAGGCGACTGAAAGCTGGATCGTCACGCTGACGGCCGGTGAAATCGAAGCTGAGCATTATCAGAACATGGGCCTGCCCAAGGTTGAAGCTGCGCGCCTCA AGGGCCGTTTGCGGGCCTGGGACAGCGTCGCCGTGCCCCGCTGGGCGGGCGTGCCCGAGGCGCAGTGCGTGCAGTTGGGGTACTTCTGCATGCAATTGCA AGCCATGCAGGCCGCGCCAGATCAGCCTCAAGCCTCCCGCGAAGCCGGTTTGGCCGATACGCGGCTGTTCCGCCAGTTCAATGGTTTTGCCCTGCCTGGC GATGCTGATGGTGCACCGACCTGGCATAACCTGATCGCCGACCTGCGGGCGCTGCTGCTCAAGGCGCGGCCCCAGGTCATCGTCTTGCCCACGCCGTTGC TTGACCCTCACGCCGACCATATCTGCGCCCACGCGGCAGTGCTGGAAGCCTTGCAGGGCCTGGAGTGGCAGCCCGACACATTGCTCGGCTACGCCAATCA CCTGCATGATAACGACCGCTGGCCAATGGGCGATTCCGGCGCTGGCGTGGCGCTGCCGCCACGTTTCGATGGTGCTGTGGAACTGGTGCCGTGCAGTTTC GCTCTCGCCTTGAGCCAGCAGCAGGACAAGGCCATGGCCCTGGGCATGATGCACGACCTGCAGCCGCCAGCGCCGTTCAAGCGTCGAGTGCGTAGGTGGT TGCAGCAACTGCTGGCGGGCCGTAGTCCATCGCCCTATGGCGAGAACGAATTCTTCCGCAAGGCCGTGCGCCGTCACGAGCTGTTGTGGGTCCTGAAGCA GGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCCGATTGAAGGCAGGCCGTTATGCGCCTGTCGCCCTTTTTACCGGGCTGCATGCCCGTAGCCAGATCGCTGCATGGAGAGTTATGAAGCCTCGTTTC AAGGTTTTGCAGTTACAGCCGGACTACAACGTCAAGACCCATGACTTCGCGGACTTGGGTGAGCAAATCGTCAAATCCCTGCCGGCTGAGCGCTTCGAGG TGACCTCCGGATTTCTCAGTGGGCGCCCGCTGCCCGGCCAGCCCCTGAGCGTGGCCGAGCACTCCCATTATTTCGAGCTGCCGGAGAAGTCCCTCAAGGG CATTCGCTTTGGCGCCATGTGGCAGATCTACAAGTACTGCCGCGAGCAGAAGTTCGACGTGGTCATCTGTAACCGCTTCAAGTCGGTGAACATGATGCTG TCGCTCAACCGCTGGTTGAAGATCCCGCTGTGCATCGGCATCTCCCACGGCTTTGGCGAGTATGCCCGTGGTTACCGTCGACGTCAGACCCAGCGCTGGG
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRIALLIGVLVLVATGVLVAWWLPLILAVLLWAAHEAWFADHLFYSPKDSYEYAFPAGSEQPGLRLEAGRLLLDAPLAADETLIVG IELKSTWLGRFFDPAVDLLGLQSPDRQAFERGVAGRRYLNLTGAAEALAAGKLELRGRFCRIKGQPTLWRFRQPDYRQQRVMVIAPHADDAELAAFSLYS QATESWIVTLTAGEIEAEHYQNMGLPKVEAARLKGRLRAWDSVAVPRWAGVPEAQCVQLGYFCMQLQAMQAAPDQPQASREAGLADTRLFRQFNGFALPG DADGAPTWHNLIADLRALLLKARPQVIVLPTPLLDPHADHICAHAAVLEALQGLEWQPDTLLGYANHLHDNDRWPMGDSGAGVALPPRFDGAVELVPCSF ALALSQQQDKAMALGMMHDLQPPAPFKRRVRRWLQQLLAGRSPSPYGENEFFRKAVRRHELLWVLKQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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