Pseudomonas aeruginosa PA7, PSPA7_3270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AGGGCGTCGCCGACAAGGACATCGCCGTGCGCCTGGTCCTGGCCGACGGCAGCGAGTACCCGCTGGCCGGCGAGCTGCTGTTCTCCGACCTGGCGGTGGA TCCCGGCACCGACACCATCGCCATGCGCGCCCTGTTCCGCAATCCGCATCGCGAATTGCTGCCGGGTGGCTACGTGCAGGTGCGCTTGCAGCGCGCAGTG AACCCGCAGGCGATCACTGTCCCGCGCGACGCGCTGATCCGCACCGCCCAGTCCGCCGTGGTCAAGGTGGTCAATCCACAGGGAGTGGTGGAAGACGTGG AAGTCCACGCCGACACCCTGCAGGGCCGCGACTGGATCGTCAGCCGCGGGCTCAAGGGCGGCGAACGGGTGATCGTCGAGAACGCCGCCCAGCATGCCGC CGGTTCCAGCGTACAGGCGGTGGTCCGCCAGCCGGCCAGCGCCGGCGCCCCCTCACCGCTGGCCGCCTCGCCGGCGGGCCAGTGACGGAGAACACTACGA
DNA Sequence for Gene
>PSPA7_3270
ATGGCTCGTTTCTTCATTGACCGGCCGGTCTTCGCCTGGGTGGTTTCCCTGCTGATCGTGCTCGCCGGGATCCTGGCGATCCGCTTCCTTCCGGTCGCCC AGTACCCGGACATCGCGCCGCCGGTGGTCAACGTCAGCGCCAGCTATCCCGGCGCCTCGGCCAAGGTGGTCGAGGAAGCGCTGACCGCGATCATCGAGCG CGAGATGAACGGCGCGCCCGGCCTGCTCTACACCAAGGCCACCAGCAGCACCGGCCAGGCCTCGCTGACCCTGACCTTCCGCCAGGGCGTGAACGCCGAC CTCGCCGCGGTGGAAGTGCAGAACCGCCTGAAGATCGTCGAATCGCGCCTGCCCGAGTCGGTGCGGCGCGACGGCATCTACGTGGAGAAAGCGGCGGACA GCATCCAGCTGATCGTCACCCTCACCTCCGCCAGCGGTCGCTACGGTGCCATGGAGCTGGGCGAGATCGCCTCGTCCAACGTGCTCCAGGCGCTGCGCCG GGTGGAAGGCGTGGGCAAGGTCGAGACCTGGGGCGCCGAGTACGCCATGCGCATCTGGCCGGACCCGGCCAGGCTGACCTCGATGAACCTCAGCGCCAGC GACCTGGTCAACGCCGTGCGCCGGCACAACGCCCGTCTCACCGTGGGCGACATCGGCAACCTCGGGGTCCCCGACTCGGCACCGATCAGCGCCACGGTGA AGGTCGACGACACCCTGGTGACGCCCGAGCAGTTCGGCGAGATTCCCCTGCGCATCCGCGCCGATGGCGGCGCGATCCGCCTGCGCGACGTGGCCCGCGT CGAGTTCGGCCAGAGCGAGTACGGCTTCGTCTCGCGGGTCAACCAGATGACCGCCACCGGCCTGGCGGTGAAGATGGCGCCCGGCTCCAACGCGGTGGCC ACCGCCAAGCGCATCCGCGCCACCCTCGACGAGCTGTCGCGCTACTTCCCCGAAGGCGTGAGCTACAACATTCCCTACGACACCTCGGCGTTCGTCGAGA TTTCGATCAGGAAGGTGGTCAGCACCCTGCTCGAGGCAATGCTCCTGGTGTTCGCCGTGATGTACCTGTTCATGCAGAACTTCCGCGCCACCCTGATCCC GACGCTGGTGGTGCCGGTTGCCCTGCTCGGCACCTTCACGGTGATGCTCGGCCTGGGCTTCTCGATCAACGTGCTGACCATGTTCGGCATGGTCCTGGCG ATCGGCATCCTGGTGGACGACGCGATCATCGTGGTGGAGAACGTCGAGCGCCTGATGGCCGAGGAAGGCCTGTCGCCGCACGACGCCACAGTCAAGGCGA TGCGCCAGATCAGCGGGGCGATCGTCGGCATCACCGTGGTGCTGGTCTCGGTGTTCGTGCCGATGGCCTTCTTCAGCGGCGCGGTGGGCAACATCTACCG CCAGTTCGCGGTGACCCTGGCGGTGTCCATCGGCTTCTCGGCGTTCCTCGCGCTGTCCTTGACCCCGGCGCTGTGCGCCACCCTGCTGCGCCCGCTCGAC GCCGGCCACCACGAGAAGCGCGGCTTCTTCGGCTGGTTCAACCGTACCTTCCTGCGCCTGACCGGGCGCTACCAGAAGGCCGTGGGCGGGATTCTCGCCC GGCCGATCCGCTGGATGCTGGTCTACGCCCTGGTCATCGGCGTGGTCGCCCTGCTCTTCGCGCGCCTGCCCCAGGCGTTCCTGCCGGAAGAGGACCAGGG CGACTTCATGATCATGGTGATGCAGCCCGAGGGCACGCCGATGGCGGAAACCATGGCCAACGTCGCCGACGTCGAGCGCTACCTGGCGGAACACGAGCCG GTGGCCTACGCCTATGCGGTCGGCGGCTTCAGCCTGTACGGCGACGGCACCAGTTCGGCGATGATCTTCGCCACCCTGAAGGACTGGTCCGAGCGCCAGG ACGCCAGCCAGCACGTCGGCGCCATCGTCGAGCGGATCAACCAGCGCTTCGCCGGCCTGCCCAACCGCACGGTGTACGCGATGAACTCGCCGCCGCTGCC GGACCTGGGCTCCACCAGCGGCTTCGACTTCCGCCTGCAGGACCGCGGCGGGGTCGGCTACGACGCCCTGGTCAAGGCCCGCGACCAGCTCCTGGCACGC GCCGCCGAGGACCCGCGGCTGGCCAACGTGATGTTCGCCGGCCAGGGCGAGGCGCCGCAGATCCGCCTGGACATCGACCGGCGCAAGGCGGAGACCCTCG GGGTGAGCATGGACGAGATCAACACCACCCTGGCCGTGATGTTCGGCTCGGACTACATCGGCGACTTCATGCACGGCAGCCAGGTGCGCAAGGTGGTGGT CCAGGCCGATGGCGCCAGGCGCCTGAGCATCGACGACATCGGCAAGCTGCACGTGCGCAACGAGCAGGGCGAGATGGTCCCGCTGGCGACGTTCGCCAGG GCCGCCTGGACCCTCGGCCCGCCGCAACTGACCCGCTACAACGGCTACCCCTCGTTCAACCTCGAGGGCCAGGCCGCGCCGGGCTACAGCAGCGGCGAGG CGATGGCGGCGATGGAACAGCTGATGCAGGGCCTGCCCGAGGGCGTCGCCCACGAGTGGTCCGGCCAGTCCTACGAGGAACGCCTGTCCGGCGCCCAGGC GCCGGCGCTGTTCGCCCTCTCGGTGCTGATCGTGTTCCTCGCCCTGGCCGCCCTCTACGAGAGCTGGTCGATCCCACTGGCGGTGATCCTGGTGGTGCCG CTGGGCGTGCTCGGCGCGCTGCTCGGGGTGAGCCTGCGCGGCCTGCCCAACGACATCTACTTCAAGGTCGGCCTGATCACCATCATCGGCCTCTCGGCGA AGAACGCCATCCTCATCATCGAGGTGGCCAAGGACCATTACCAGGAAGGCATGGACCTGCTGCAGGCGACCCTGGAAGCCGCGCGCCTGCGCCTGCGGCC GATCGTCATGACCTCGCTGGCCTTCGGTTTCGGGGTGATCCCGCTGGCGCTCTCGAGCGGCGCCGGTTCCGGCGCCCAGATCGCCATCGGCACCGGGGTG CTCGGCGGGATAGTCACCGCCACCGTGCTCGCGGTGTTCCTGGTGCCGCTGTTCTTCCTGGTGGTCGGCCGCCTGTTCCGGCTGCGCAAGGCGCCTCGCG CCGATGCGTCGGCCAATACCCCAACGGAGCTGACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCCCCTTTCGAAACTCTCGGCCTCCTCCCTGGCGCTGTGCCTGGGCCTGCTCGGCGCCTGTTCGCTGGCGCCCCGCTACCAGCGCCCGGAGGCGCCGAT CCCGACGGCCTATCCGGCCGTCCCGGCGAGCCAGCAGGCTGGCGACCGGGCCAGGCTGGACGACTGGCAACAACAGTTCACCGACCCGGTGCTGCGCCAG ATGATCGGCCAGGCCCTGGAGCACAACCGCAACCTGCGCGTCGCCGCCCTGCGCATCGAGGAAGCCCGCGCGCTATATGGCGTACAGGCCTCGGAGCGCT TGCCGACGCTGGAGGCCAGCGGTCGCTACGAGCGCGAGCGCATGCGCGGCGAAACCCGCGAGGCCGGCCAGGTCGAACAGCGCTATCGGGTCGCAGCCGG CATCAGCGCCTTCGAGCTGGACTTCTTCGGCCGGGTGAAAAACCTCGGCGACGCCGCCCTGGCCGACTACCTGGCCAGCGAGGAGGCCCAGCGCAGCGCG
Amino Acid Sequence
>multidrug efflux protein
MARFFIDRPVFAWVVSLLIVLAGILAIRFLPVAQYPDIAPPVVNVSASYPGASAKVVEEALTAIIEREMNGAPGLLYTKATSSTGQASLTLTFRQGVNAD LAAVEVQNRLKIVESRLPESVRRDGIYVEKAADSIQLIVTLTSASGRYGAMELGEIASSNVLQALRRVEGVGKVETWGAEYAMRIWPDPARLTSMNLSAS DLVNAVRRHNARLTVGDIGNLGVPDSAPISATVKVDDTLVTPEQFGEIPLRIRADGGAIRLRDVARVEFGQSEYGFVSRVNQMTATGLAVKMAPGSNAVA TAKRIRATLDELSRYFPEGVSYNIPYDTSAFVEISIRKVVSTLLEAMLLVFAVMYLFMQNFRATLIPTLVVPVALLGTFTVMLGLGFSINVLTMFGMVLA IGILVDDAIIVVENVERLMAEEGLSPHDATVKAMRQISGAIVGITVVLVSVFVPMAFFSGAVGNIYRQFAVTLAVSIGFSAFLALSLTPALCATLLRPLD AGHHEKRGFFGWFNRTFLRLTGRYQKAVGGILARPIRWMLVYALVIGVVALLFARLPQAFLPEEDQGDFMIMVMQPEGTPMAETMANVADVERYLAEHEP VAYAYAVGGFSLYGDGTSSAMIFATLKDWSERQDASQHVGAIVERINQRFAGLPNRTVYAMNSPPLPDLGSTSGFDFRLQDRGGVGYDALVKARDQLLAR AAEDPRLANVMFAGQGEAPQIRLDIDRRKAETLGVSMDEINTTLAVMFGSDYIGDFMHGSQVRKVVVQADGARRLSIDDIGKLHVRNEQGEMVPLATFAR AAWTLGPPQLTRYNGYPSFNLEGQAAPGYSSGEAMAAMEQLMQGLPEGVAHEWSGQSYEERLSGAQAPALFALSVLIVFLALAALYESWSIPLAVILVVP LGVLGALLGVSLRGLPNDIYFKVGLITIIGLSAKNAILIIEVAKDHYQEGMDLLQATLEAARLRLRPIVMTSLAFGFGVIPLALSSGAGSGAQIAIGTGV LGGIVTATVLAVFLVPLFFLVVGRLFRLRKAPRADASANTPTELT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site