Pseudomonas aeruginosa PA7, PSPA7_0004 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTGTTCGAGGAAACCCTCGCCGAGCTGGTTTCGCTGGATGACCTGACCCTGAGCTACTACCGAGGCTGGGACAAGGACCGGGACCTCCAGGACGTCC TGGCCTCCAGCCTGTTGCGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGGCGGGTCATAACGCAGCCGA GATTCTCTCGCGCGGACAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAGGGGCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTCTACCTG GTGGACGACCTGCCCTCGGAACTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCGTGGACC CGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTAGCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAGTGAAGC
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| DNA Sequence for Gene |
>PSPA7_0004
|gyrB
ATGAGCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACG ATGGCACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGACAACTCCATCGACGAAGCGCTGGCCGGCTATTGCAGCGAAATCAGCATCACCATCCATAC GGACGAGTCGATCACCGTCCGTGACAACGGGCGCGGCATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATCATGACCGTCCTC CACGCCGGCGGCAAGTTCGACGACAACACCTACAAGGTGTCCGGCGGCCTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAATTGCGCC TGACCATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTGCCGCAATTCCCGCTGCGCGAGGTGGGCGAAACCGACGGCTCCGGTAC CGAGGTGCACTTCAAGCCGTCGCCGGAGACCTTCAGCAACATCCATTTCAGCTGGGACATCCTGGCCAAGCGGATCCGCGAATTGTCCTTCCTCAATTCC GGCGTCGGCATCCTGTTGCGTGACGAACGCACCGGCAAGGAAGAGCTGTTCAAGTACGAGGGCGGCCTGAAGGCCTTCGTCGAGTACCTGAACACCAACA AGTCCGCGGTGAACCAGGTCTTCCACTTCAATGTCCAGCGCGAAGAAGACGGCGTGGGCGTGGAAGTCGCCCTGCAGTGGAACGACAGCTTCAACGAGAA CATCCTCTGCTTCACCAACAACATCCCGCAGCGTGACGGCGGCACCCACCTGGCCGGCTTCCGCTCGGCGCTGACGCGTAACCTGAACAACTACATCGAG GCCGAGGGCCTGGCGAAGAAATTCAAGATCGCCACCACCGGCGACGACGCCCGCGAAGGCCTCACCGCGATCATCTCGGTGAAGGTGCCGGATCCGAAAT TCAGCTCGCAGACCAAGGACAAGCTGGTCTCCTCCGAGGTGAAGACCGCGGTGGAACAGGAAATGGGCAAGTACTTCGCCGACTTCCTGCTGGAGAACCC CAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGATGCCGCGCGGGCCCGCGAGGCGGCGCGCAAGGCGCGCGAGATGACCCGCCGCAAGGGCGCGCTG GACATCGCCGGCCTGCCCGGCAAGCTGGCAGACTGCCAGGAGAAGGACCCGGCGCTCTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGCGGCTCCG CCAAGCAGGGCCGCAACCGCCGGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCGCGCTTCGACAAGATGCTCTCTTCCCA GGAGGTCGGCACGCTGATCACCGCCCTGGGTTGCGGCATCGGTCGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGAT GCTGACGTCGACGGTTCGCACATCCGTACCCTGCTGCTGACCTTCTTCTTCCGCCAGATGCCCGAGCTGATCGAGCGCGGCTACGTGTACATCGCCCAGC CGCCGCTGTACAAGGTCAAGCGTGGCAAGCAGGAACAGTACATCAAGGACGACCAGGCCATGGAAGAATACATGACCCAGTCGGCCCTGGAAGACGCCAG CCTGCACGTCAACGAGCACGCCCCGGGCCTGGCCGGCGCGGCGCTGGAGAAGCTGGTCAACGAGTACCGCGGGGTGATCGCCACCCTCAAGCGCCTCTCG CGCCTGTACCCGCAGGAGCTGACCGAGCACTTCATCTACCTGCCCACCGTGTCGGTGGATGACCTGGCCAACGAGTCGGTGATGCAGGGCTGGCTGGAGA AATTCCAGGCGCGCCTGAGCGCCGCCGAGAAGTCCGGCCTGACCTACAAGGCCAGCCTGCGCGAAGACCGCGAGCGCCACCTGTGGCTGCCCGAGGTGGA ACTGGTGGCTCACGGGCTGTCCAGTTACGTCACCTTCAACCGTGACTTCTTCGCCAGCAACGACTACCGCTCGGTGTCGCTGCTCGGCGACCAGTTGAAC AGCCTGCTGGAGGACGGCGCCTACGTGCAGAAGGGCGAGCGCAAGCGGCCGATCAGCGCCTTCAAGGACGGCCTGGACTGGCTGATGGCCGAAGGCACCA AGCGCCACAGCATCCAGCGATACAAGGGACTGGGCGAGATGAACCCGGAACAGTTGTGGGAAACCACCATGGACCCGAACGTCCGCCGCATGCTCAAGGT CACCATCGAGGACGCCATCGCTGCCGACCAGATCTTCAACACCCTGATGGGCGATGCCGTGGAGCCGCGTCGCGACTTCATCGAAAGCAACGCGCTGGCG GTGTCGAACCTGGACGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGGTCGATAGGCCAATCCTCAGGAAACCCCAACCCCGGCCTGGCGCCGGGGTTTTCTTTTTTGGTCGGGTAACCGGATACAGGCCCGTGCCTGCCTTGC CGAAGTGTGATCGAGTCCGCCAGCTACCCGCCGGCATTGGCGCCCTGGACCCAGGTGTCCGGGCGGGCGTTCCACCGGTCTGGGGCTGCGGGACACGCCA GCCGGTTCGCTCGGTCGTTGCCAGCCGGCCTGTGCTTGGGTCTCGCGTGAAAACAGGAAGCCCCGCTATGGCGGGGCTCCTTTTATCGAATCGGCGCACA GGAGGCCTTGCAGGGGCCTTTGCGGCGGCCTCACGAAACCACAGACGGCTCCGGATGGCTGACCCGCTGCTGGGTGGGGCTGATCTCGGCCATGGTCTCG CTGACCCAGGCCTCGGCGCGCTGGTTGAGCTCGGCGATGGCGCGCGGGCCTTCGCCTTCGGCGTGCATAGCCGGGCCGATCACCACCTGGATGGTGCCCG
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVL HAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNS GVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKSAVNQVFHFNVQREEDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGAL DIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTD ADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLAGAALEKLVNEYRGVIATLKRLS RLYPQELTEHFIYLPTVSVDDLANESVMQGWLEKFQARLSAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLN SLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALA VSNLDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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