Pseudomonas aeruginosa UCBPP-PA14, PA14_70300 (sphA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAGGCCAAGGGTGCCGAGCACGTTCTGGTGTCCGACCCACAGCCCCAGCCCCCGCTCCGGCAGGGCCTGGAGGGCACGCTGGATCATGCTCACGGCCT GGCGGTAGGAGATGCGCTGGGTAGGGTCCTGCAGGTCTTCGACGGTGAAGCCCAGGCCCCGGCACAGCCGCGCGGGATCGACGCCATGGCCTTCGACCAC CTCGGCCAGCGTCTGCAGCAGGAAGGTGGATACCTGGGCGAGTTCGTAGCGCGCATCGGCGGCATTGTTGTGCATGGGCGAAATCCTGAGCCGGTCTCGG CTTCGTTCTTGTTCTGGCGGTGGATCGCGACATGGGATGAGCGTCCCATCATATAGCGTTCCGCACAGATGTAACAAAGCATTGCACGGTGTCCGCAAAT CCCCCCCTCGCTGACCGTCAATGCCCTGCCTCGGCCTGTCGATAGGGCTTATTCCTATGCCGTACCCCGAGCCACGCCAAACAATAATAAGAGCCCGCCC
|
|
| DNA Sequence for Gene |
>PA14_70300
|sphA
ATGAATCCGACCCACCCCCGCAGGCCCCTGCGCCTGGCCGCCTGCGTCACCCTCGCCTTCAGCTGCTGCACCCATGCCAGCGAAGGCGGCGTGGACAACA TAGGTCCAGGAACCGACGGTTTCTTCACCCTGCCACTGGACGTCGACAACCTCCCGGACCACATGTTCGCCTTCAACGTCTACTACAACCACTACGAAGC CAGGAAGCTGAACATCAGCTCCTTCGGCGGCAAGGTGTCCGACGTGAAGATCAGCTCGGATGCGATCATCCCTCGCCTGGACTACCTGAGCCCGCTGCGG ATCTTCGGCGGGCGCCTGGGCGGCTACATCGCCCAGCCCTATATCCGCCAACGGGTGGCCGCGTTCGGCCTGAGCGACGAACGGGAAAGCATGGGTGACA CCACCTTCGCGCCGATCATCCTCTGGGACATGGGCAAGGACCTGACCCTGGCCGCCGCCATGGAGGTCACCGTGCCCACCGGCAAGTACGATGCCGAGCG GCTGGCCAACACCAGCAACAACTTCTACACCTACAAGCCGCTGTTCTCCTTCACCTGGCTGCCCACCGAACGCACCGAGCTGTCGCTGAAGGCCACCTAC AGCTTCAACATGGAAAACCACGACACCGACTATCGCTCGGGGCAGATCTTCCATTTCGACTATTCCGCCAGCTACCGGGTGACCGACAACCTGCGCCTCG GCCTGAACGGCTACTACCTCAAGCAGACCACCGACGACAAACAGAACGGCGAGACCGTACGGGTGTTCGGTTTCGGCGAGGAAGTCGACGATGGCGTACG CGGCCAGGTCTTCGCCATCGGCCCGGCCGTGCACCTGACCTTCCTCAAGTACGCCAGCGCGGAGATCCGCTGGGCCAAGGAATTCGACGTGGAGAACCGC CCCGAGGGCGACATGCTCTGGGCCAAGCTGACCATTCCGTTCGAACTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCATCGGAACGAAGCGGCAGCCCGGTATCCGCGGGCTGCCGCCATCGACGAGGAAAAGCGCCAGGCGTCCTAGGCGTAAACCGGCCAGCGCTCGACGAT CCGCCCGCCGCGCAGCGCCAGCAGGTCGCCGAATTGCAGCAGCACCGCCTCGCTCTGGGTCGGCCGCAGGAAGACCTGGTCGTCCACCTCCAGGCCCACC GAAGGCGAGCCGTTGACCATTTCCTGGTTCGAGCTGCGCCCGTAGATGCCGTTGCTGCGCAGTCCCTCGGGCGAGGCGAAGTCGGCCATCCAGTTGCCGC CGTAGATGAAGAAGGTGCCGCGCTGGTTGGGGTCCCACCAGGAAAACAGCCGCGACTTGCCGTCCAGCGCCGGGATCTGCACCGCGCCGGTGCTCTTGAG TACCGGCGTGGCGATGTAGACGGCCGGCACATGCTCGGCCAGGGACGCCAGGTCGTAGTGGCTCGGCTTGAGCATGGCGGTGCCCACCGAGACCTCGCTG
|
|
| Amino Acid Sequence |
>SphA
MNPTHPRRPLRLAACVTLAFSCCTHASEGGVDNIGPGTDGFFTLPLDVDNLPDHMFAFNVYYNHYEARKLNISSFGGKVSDVKISSDAIIPRLDYLSPLR IFGGRLGGYIAQPYIRQRVAAFGLSDERESMGDTTFAPIILWDMGKDLTLAAAMEVTVPTGKYDAERLANTSNNFYTYKPLFSFTWLPTERTELSLKATY SFNMENHDTDYRSGQIFHFDYSASYRVTDNLRLGLNGYYLKQTTDDKQNGETVRVFGFGEEVDDGVRGQVFAIGPAVHLTFLKYASAEIRWAKEFDVENR PEGDMLWAKLTIPFEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|