Pseudomonas mendocina EGD-AQ5, O203_RS41125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF005419 FlhA IPR001712 Type III secretion system FHIPEP 16 715 0.0
PANTHER PTHR30161 FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED IPR001712 Type III secretion system FHIPEP 25 713 0.0
NCBIfam TIGR01398 JCVI: flagellar biosynthesis protein FlhA IPR006301 Flagellar biosynthesis protein FlhA 30 712 0.0
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 40 704 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 46 59 8.4E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 83 102 8.4E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 150 166 8.4E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 169 187 8.4E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 199 216 8.4E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 250 264 8.4E-55
Gene3D G3DSA:3.40.30.60 FHIPEP family, domain 1 IPR042194 FHIPEP, domain 1 377 520 3.0E-54
Gene3D G3DSA:1.10.8.540 FHIPEP family, domain 3 IPR042193 FHIPEP, domain 3 521 607 1.4E-25
Gene3D G3DSA:3.40.50.12790 FHIPEP family, domain 4 IPR042196 FHIPEP, domain 4 612 712 4.7E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.