Pseudomonas aeruginosa UCBPP-PA14, PA14_44890 (hcpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCCCAACCTCTCCAATAACTCACTTTCCTTCACCCAGGGCCGCTGGAACGAAACCGTGCGGCGCTCCACCATTGAAAGCGACCAACCAACCGTCGC TATCCGCAGGTACGTATCGTCTCGTATTTGCCCAGCAAACTTCGCTCGGGTGATCTGTGTGGCCGGGGGACCGGTGCTGCGTCGTGTGATAGTGCGCGCC CCATCTTCGGCTGCCTTGCCAATGAAGAACTGTGCAACTTTTTGGTTGATAACGTTGTGGATAGAACGCTAGGGAACAAATACCCAAAGGGCTCCGAGAG AGTGCGCAACTTTTTGCAAGCGGTGCGCAAAAAGTTGCGCAATTTTCAGTGTTCTTCCCATGAGAATCGCCAGCGAGTTTTTGGCTTCCCCCAATAACGC CTTGATGGAAAAGAGTTTCAAGACTAGTGGCACGGTTCTTGTCTAGCACCGATGTCCCCGGCATACCGCCTGGGCACTTTCAACGACAAGGAACGTATCC
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| DNA Sequence for Gene |
>PA14_44890
|hcpA
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGACTCGGTCGGCAACACCTATCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGTGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC TGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCACAACTGCCAGGACCCGG GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCGACGACTGGCG CTCGCCGGTGGCAGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGACAGGCACACCGGTCGTACACCTGTGCGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCGACTTCGCGAAATCGACACAGAGCCAAAGACTTTCGG CGCCGGCTGAGCAAGAGTAACGTGGCTTGCTCCTCCAATGGATTGGAAAGGAACTGCCCACCCGGAACAGGGAACGATCCATGCGTCAAAGAGACCTGAA ATTCACCTTCGTCGTTGGCGAAGGGAACCTTGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTTTCCGCCTGAACCTGAAGCTG GTCAGCGACAAGAACGCCATCGATTTCAAGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGCAGGACGGCCGTCCTGCCCGCTACGTCCATGGCA TCGTCAGCCACTTCACCCAAGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCACAGTTGGCGCGCCTGGAGCTGTGCTGCAACTG
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| Amino Acid Sequence |
>secreted protein Hcp
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYR TSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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