Pseudomonas simiae WCS417, PS417_RS00930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain WCS417. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGGTTCGCTGGCGTCGCAAAGGCAAATGCCGAGGCGACGACGCGTTACAAAGCCAGGCACTGCGCTTAGACTTGAGACGGGTTTGTTTTCCTGGGGCA AGTCCACCAATTCGGGAGAGAGTTTTCATGAAGCTAGTCACTGCCATCATCAAGCCGTTCAAGTTGGACGATGTACGCGAGTCGTTGTCCGAGATCGGCG TGCAGGGCATTACCGTTACTGAGGTCAAAGGCTTCGGTCGGCAGAAGGGTCATACCGAGCTGTATCGCGGCGCGGAATACGTGGTCGATTTCCTGCCGAA GGTGAAGATTGATGTCGCCATTGACGACAAGGATCTTGACCGGGTTATCGAGGCGATAACCAAGGCCGCCAACACCGGCAAGATCGGTGACGGCAAGATC TTCGTGGTCAATCTGGAACAGGCTATTCGCATCCGTACCGGCGAAACCGATACCGACGCAATCTAAGCCGCCAAACCCCAACGCCCCAGGAGAAAACAAT
|
|
| DNA Sequence for Gene |
>PS417_RS00930
ATGACTCTGCGTAAATTCGCAGGGCTCGGAGCCCTGTTGTCCATCGTAATGCCAAGCCTGGCCATGGCGGCAGACGAAGTGGCTGCTCCAGTCCTCAATT CCGGCGACACCGCCTGGATGTTGACCGCCACCGCTTTGGTGCTGTTCATGACCATCCCTGGCCTGGCGCTGTTCTACGGCGGCATGGTCCGCTCCAAGAA TATTCTGTCGGTGATGATGCAGTGTTTCGCGATCACCGGCCTCATCAGCATCCTCTGGGTCGTATACGGCTACAGCATCGCGTTCGATACCACCGGTATG GAACAGGGTGTGGTCAACTTCAACTCCTTCTTCGGCGGCATGGGCAAGGCGTTCCTGGCGGGCGTGACCCCGGCCAGCATCACCGGCCCTGCAGCGCTGT TCCCGGAAGCGGTGTTCATCACCTTCCAGATGACCTTCGCGATCATCACCCCGGCGCTGATCGTCGGTGCCTTCGCTGAGCGTATGAAGTTCTCCGCGAT GCTGATCTTCATGGCTATCTGGTTCACCCTGGTTTATGCGCCGATCGCGCACATGGTCTGGAGCGGCAACGGTGGCCTGATGTGGGACTGGGGCGTGCTG GACTTCGCCGGCGGCACCGTGGTGCATATCAACGCGGGTGTGGCTGGCCTGGTGGCGTGCATCGTGCTCGGCAAGCGTAAAGGCTTCCCGACTACTCCAA TGGCTCCGCACAACCTGGGTTACACCCTGATCGGCGCGGCCATGCTGTGGATCGGCTGGTTCGGCTTCAACGCTGGTTCCGCGGCTGCGGCCAACGGCAC TGCCGGCATGGCGATGCTGGTTACCCAGATCGCTACCGCTGCTGCAGCGCTGGGCTGGATGTTCGCCGAGTGGATCACCCACGGTAAGCCAAGCGCACTC GGCATCGCCTCGGGTGTGGTGGCGGGCCTGGTAGCCATCACCCCAGCGGCTGGCACCGTGGGCCCGATGGGCGCCTTGGTGATCGGCCTGGTTGCCGGTG TGATCTGCTTCTTCTGCGCCACCAGCCTCAAGCGCAAGCTGGGCTACGACGACTCCCTGGACGCGTTCGGCGTGCACGGTATCGGCGGTATCGTCGGTGC GATTCTCACCGGTGTGTTCGCAGCCCCTGCGCTGGGCGGCTTCGGCACCGTGACTGACGTTGCCGCGCAGGTTTGGATCCAGTGCAAAGGCGTTGGCTTC ACTGTGATCTACACGGCGATCGTGACCTACGTCATCCTCAAGGTGCTGGACATGGTCATGGGCCTGCGGGTGACCGAAGAAGAGGAGGCCGTCGGCCTCG ACCTGGCGCAACACAACGAGCGCGGCTACAACTTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTACGCATAAAAAAGATGCCCGGCTTGCCGGGCATTTTTTTGCCTGGCGTTTGTCAGTCATAACACGCTGTGTCGGTTTTTTCGTCGAGTTTGTGATGAG GTTCACCCGGCACTTTTCCGCGTGCCAATGTCTTACAGGCATGTAGGCGTATTCGGCACTTTGTTTTTTCCCAGAGCGCGCTAGAATGCGCGCCGATGGG CGGAGAACTGTATGTGGCAACAGACCTTGATTACCCTGCGGGCCAAGCCCCGGGGCTTTCACCTGGTGACCGATGAGTTGCTGGCCGGCTTGCCTGAGTT GAAGGCCTGTCGCGTGGGCTTGTTGCATCTGTGGTTGCAACACACTTCGGCCTCGTTGACCGTGAACGAGAATGCCGACCCGGCGGTTCTCCGTGACTTC GAACGTTATTTCAACGCGCTGGTGCCGCAAGGCCTTGCCGGGTTTGAACACAACGACGAAGGTCCGGATGACCTGCCGGCGCACTTCAAGGCCAGTCTCC
|
|
| Amino Acid Sequence |
>ammonium transporter
MTLRKFAGLGALLSIVMPSLAMAADEVAAPVLNSGDTAWMLTATALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLISILWVVYGYSIAFDTTGM EQGVVNFNSFFGGMGKAFLAGVTPASITGPAALFPEAVFITFQMTFAIITPALIVGAFAERMKFSAMLIFMAIWFTLVYAPIAHMVWSGNGGLMWDWGVL DFAGGTVVHINAGVAGLVACIVLGKRKGFPTTPMAPHNLGYTLIGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSAL GIASGVVAGLVAITPAAGTVGPMGALVIGLVAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGGFGTVTDVAAQVWIQCKGVGF TVIYTAIVTYVILKVLDMVMGLRVTEEEEAVGLDLAQHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|