Pseudomonas sp. WCS374, PD374_RS04370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCAAGGCCTCGGCGGCTTCGAACCCTATGTCGAAAAAAAGGGCGAGGAGTACATGGGCGAGCCCATGCGCGAGCACTTCACCAAGATCCTCAACAAGT GGAAACAGGACTTGATGCAGGAAGTCGACCGTACGGTTGACCATATGAAGGATGAAGCGGCCAACTTCCCTGACCCGGCCGATCGTGCCAGCCAGGAAGA AGAGTTCGCCCTCGAACTGCGCGCCCGCGATCGCGAGCGCAAGTTGATCAAGAAGATCGACAAGACCCTGCAACTGATCAAAGACGAAGAATACGGCTGG TGCGAATCCTGCGGCGTCGAAATCGGTATTCGCCGACTGGAAGCCCGCCCAACCGCAGACCTGTGCGTAGACTGCAAGACCTTGGCTGAAATCAAGGAAA AACAGGTCGGCAAGTAACGTTGCCGAGTTGAACGAATGGAGCGTGCGAACGCTCCATTTTTGTTTCTGGCGTTTATCGGTTATGCAGTAGTATCCGGGCC
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| DNA Sequence for Gene |
>PD374_RS04370
ATGACAGCCTCTACCTATATTGGGCGTTTCGCCCCCACACCCAGCGGCCATTTGCACTTCGGCTCCCTGGTTGCCGCCCTTGCCTCCTACCTCGATGCGC GCGCCCACCAGGGCCGTTGGTTGATGCGCATGGAAGACCTTGACCCTCCGCGTGAAGAGCCCGGCGCCCAGGCGGCGATTCTGCATGCGCTGGAAAGCTA CGGCTTTGAATGGGATGGCGCACTGGTTCGCCAGAGCGAGCGGCATGATGCCTACGCCAAAGTACTGAACGATATGTTCAACCACGGCCTGGCCTACGCC TGCACCTGCTCGCGCAAGCAGTTGGAGCCCTACAACGGGGTTTACCCAGGCTTGTGCCGCAATGCCGGCCACGACCAGCAAGACGCCGCCATCCGCCTGC GCGTGCCCGAGCTGGAATACCACTTTACCGACCGTGTGCAGGGCGAGTTCCGGCAGCATCTGGGCCGCGATGCCGGCGACTTCATCATCCGTCGCCGCGA CGGCCTCTACGCCTACCAACTGGCGGTGGTGCTCGACGACGCCTGGCAAGGGATAACCGATATCGTGCGCGGCGCCGACCTGCTCGACTCCACACCGCGC CAGCTGTACCTGCAAGAGCTGCTTGGCCTGCGCCAGCCACGTTACTTGCATGTACCGCTGATCGTGCAGCCAGACGGCAACAAGCTGGGCAAGTCCTACC GCTCTCCACCGTTGACAGCCGACCAGGCCACGCCTTTGCTGCTCAGAGCACTGCGCGCCCTTGGCCAACAGCCCGACGCGCAACTGCTGTACGCCAGCCC ACGAGAACTGCTGGATTGGGGCATTGCACACTGGGACGCCACCCGCATCCCGCGCACGCTGACCCTGGCCGAAGCGCAATTGAGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCGCTTGCAGGTTGCCAGCCATCCGTTAACATCGCGGCAGATTTTTAATCAGAGGCCAACATGTACATCTATCGTTTGGTCCTGCTGCTGGTCGTCGG GATCTACCTGTTCTCCCCCGCCATCATGGATTGGTGGATCGACGCCACGGGCGCCTGGTATCGCCCTTATCTGCTATGGCTGATCCTGATCGTCGTGACC TTCATCCTGCAGAGCCAAAAAGATGCCGATGAGCTTTAGTCTCACCCAGATGCTGCTGATCAGCGCCGCCTACCTGGCTGCGTTATTCGGCGTGGCCTGG ATCAGTGAGCGCGGAATGATTCCGCGGGCGATCATTCGCCATCCGTTGACCTACACCTTGTCCCTGGGCGTGTACGCCAGTGCCTGGGCGTTCTACGGCA CGGTGGGGCTGGCCTATCAGTACGGCTACGGCTTTCTCTCCAGTTACCTGGGGGTGTCCGGCGCGTTCCTGCTGGCGCCGGTGCTGCTGTACCCGATCCT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTASTYIGRFAPTPSGHLHFGSLVAALASYLDARAHQGRWLMRMEDLDPPREEPGAQAAILHALESYGFEWDGALVRQSERHDAYAKVLNDMFNHGLAYA CTCSRKQLEPYNGVYPGLCRNAGHDQQDAAIRLRVPELEYHFTDRVQGEFRQHLGRDAGDFIIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPR QLYLQELLGLRQPRYLHVPLIVQPDGNKLGKSYRSPPLTADQATPLLLRALRALGQQPDAQLLYASPRELLDWGIAHWDATRIPRTLTLAEAQLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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