Pseudomonas aeruginosa 3580, AJ67_03433
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3580 adTxz-supercont1.10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCTGTCGGCGGCCTGGCAGGACATCCAGGCGCGCTTCGCCGCGACGCCGCTGGAGCGGGTCGTGGCCTTCCTGCAGAAAGCCCTGAGCGCCGACCTGG ACAGTCAGTCGAGCCGGCTCGATCCGGTGAAGCTGGAGCGGGTCATGAGCGACATGCACAAGCTGCGCGTGCTCGGCGGCCTGGCGGAGCAGGTGGGGGC GCTCTGGCAGGTGCTGGTGACGGGGGAGCGGGGCCATGGCATACGGGCCTTCTGAATTGACCGGCGCAGTCATCGCCTTGCTCGAGAAGCGCTGGGTCGG CGTCGCCGAGGTGCAGGCGTTGCTCGAGCCGTTGCCGCTGGCCGACGTCGCCCGGCAGATCCATTTCTTCCGCGAACTGAAGCGTCTCTACCGCCTGTTG CCGGTCGAAGTGTTCGGCGACGACGAGCAGCGCCAGAATCTTTTGAATGCCTGCCAGATGGCACTCGACCTGGCGATCGAGCGCGAAGAGGAGCAGCAGC
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| DNA Sequence for Gene |
>AJ67_03433
ATGGACTGGGTTGAGCTGGCCGTCGCGCAGTTCTGCCAGGACCTGCGGGTGAGCGTACCGGCGCCGTTGGCGCGCGTGGTGCAACTGGATTTCGAGGACA GCGGCACCTTGCAGCTGGAACGCCATGGCGAACAGTTGTCGCTCTGGCTGGCCTGTGACCTGGCCTGGCACCAGGCCTATCGCGGCACCCTGCGGGCGTT GCGCCTGTGCCATGCGCGCGCGGCCGGGAGCCTGCCGCTGCGTTGCGCCTGGAGCGGCGAATCGCGCCTGCTGCTGTGCATCACCCTGGAAGCCCGGCAG GTCGGCATCCCGACGTTGCACCAGGCCTTGCAGGCGCTGCGCTCGGCGCGCAGCGAAGTGCTCGCCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGGTCGGTGCCTGGCACATCGGCATCGAACGACTCGACCTGGCGCATGCCGAGCCGTTCGCGCCGCCCCTGCCGGAGCGCCATCTGCTGGCGCCCGA CGGCCGGCCGGTGGAGACCCACGTCGCCAGCCTGTATCCCGCGCAGCAGGCGCAACAGCGCCTGTTCGACTACGCCCGGCCCCAGCTGGAGTTCCACGGC CTGCTGCGCCCCGGCGACTTCCGCCAGGCGCTGCGCGATCTCCGCCTGGCCCTCACGCTGCCCCGCCAGCCGGCCCTGCAGGCCGCGGCCTGCCTGCTCG GCGAGCGCGATGAAGACGAGCGACTGCTGCAAATGGCCCTGAACCTGTTGCACAAGGTATGAATCGATGACGTTGAAACCGACGCAACAGCGCCTGTTGC TGATGCTGGGCTGGTTGCACCTGCAATGCGGCCAGCCGCGACGCGCCCAGGTGTTGCTGGAGGCCTTGCTGAGCGTTGCGCCGGAGCGCCGCGACGGGCG
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| Amino Acid Sequence |
>type III secretion protein
MDWVELAVAQFCQDLRVSVPAPLARVVQLDFEDSGTLQLERHGEQLSLWLACDLAWHQAYRGTLRALRLCHARAAGSLPLRCAWSGESRLLLCITLEARQ VGIPTLHQALQALRSARSEVLAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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