Pseudomonas aeruginosa 3577, AJ64_05529
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 3577 adTvG-supercont1.35, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCCGGTCCGGCGGCCAGCCAGCAGAGCCCCAACGCCCCGGTGGTGAAGGCACTGGACGGCATCGAGGCCAAGCTGCCGGGCTACATCGTGCCGCTGGA AATCAGCGAGGCCGGGCTGGTCACCGAGTTCCTCCTGGTCCCCTACTACGGCGCCTGCATCCACGTACCGCCGCCGCCGTCGAACCAGATCGTCTACGTG AAGACCGCCAAGGGCGTGCAGATGGACGAGTTGTACCAGCCATTCTGGGTCGAGGGCACCTTCAAGGTGGAGAACGCCAGCAGCGAGCTGGCGGCGGCCG GCTACCGCATGCAGGCGAGCAAGGTGACGCCCTACGAATACGAAGGTGGCTGAACGATATGCGACAATCCGCCGCGCCATTTACGTTGCGGCGGTCACAT TTGCTCCTAGAATTGATTGAGCTGTGTCAAGGAAGGCAACTGTTAGCTGGCTGACCATTAGCAGCACCAACACTTTCTAATACAAGGAATGGAGCTCATC
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| DNA Sequence for Gene |
>AJ64_05529
ATGCGTAAGTCCTGGCTTACCGCTTCCCTGCTGGCCCTCACCGTCGCCTCCCCGTTCGCCGCTGCGGATATTCAAGGACACAAGGCCGGTGACTTCATCA TCCGTGGCGGCTTCGCCACCGTCGATCCCGACGACAGCAGTTCCGACATCAAGCTGGACGGCGCCAAGCAGCGCGGTACCAAGGCGACTGTCGACAGCGA CACCCAGCTCGGCCTGACCTTCACCTACATGTTCGCCGACAAGTGGGGCGTGGAACTGGTCGCCGCCACTCCGTTCAACCACCAGGTCGACGTCAAGGGC CTCGGCCCGGGCCTGGACGGCAAGCTGGCCGACATCAAGCAACTGCCGCCGACCCTGCTGCTCCAGTACTACCCCATGGGCGGTACCAACAGCGCCTTCC AGCCCTACGGCGGCCTGGGCGTGAACTACACCACCTTCTTCGACGAAGACCTCGCCAGCAACCGCAAGGCGCAGGGTTTCAGCAGCATGAAGCTGCAGGA CTCCTGGGGCCTGGCCGGCGAACTGGGCTTCGACTACATGCTCAACGAGCACGCGCTGTTCAACATGGCCGTCTGGTACATGGACATCGATACCAAGGCC AGCATCAACGGCCCGAGCGCCCTGGGCGTGAACAAGACCAAGGTCGACGTGGACGTCGATCCGTGGGTCTACATGATCGGTTTCGGCTACAAGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGTAGACTGTCGCGGGGCTTGCGCCCCCAACGGGAAAAGGCGCCTTCGGGCGCCTTTTTTCATCCTGTGGAAACGGACCCCATGTACCTCTGGCTGAA GACCCTGCACATCACCTTCGCCCTCAGCAGCGCCGCCCTGTTCGTCTGGCGCCTGGCCTGGAACTGGTCGGGGCGCAAGGCCAGCGGCATCCGCCGCTGG GGACCGCACCTGGTGGACACCCTGCTGCTGCTCAGCGCGCTCGGCCTGGTGCACCTGGCGATGCCCTGGCCGCTGCCGCTCTGGCTGCTGGCGAAGCTGG GGCTGTTGCTGGGCTACATCGTCTGCGCGGCGTTCGCCCTGCGGATGGCGCGGGGCCCCGGCAAGGGCCTGCTCAGCGTCCTCAGCCTCACCCTGCTGGG CGGGATCTTCTACCTGGCGCTGAACAAGCCCTGGTGGTGATCAGCGTCCGAGCAGGCGCGCCAGGCCCACGCCCATCGGCGTCGGCTGGTCGAAGCGGAA
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| Amino Acid Sequence |
>outer membrane protein W
MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKG LGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKA SINGPSALGVNKTKVDVDVDPWVYMIGFGYKF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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