Pseudomonas aeruginosa BWH056, V557_03411
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH056 adTwB-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGTGGCGGAAGCGGCTCAGGCGCGGTAGCAGCCAGCGCAGGGTAAGGGTGGAAGGCGCCTTCAGGCGCAGGGTGGCGTCGTCCACACGCAGGGCGGT GCAGGCCCGTTCCAGCGCATCGAAGCCGTCGCGCAGCCCGGGCAGCAGCAGGCGTGCCGGCTCGGTCAGCTGCAACTGGCGGCCATGGCGCTCGAACAGA CGACAACCGAAGTGCTCCTCCAGGGTACGGATGTGCCGGCTCACCGCGCTCTGGGTTATCGCCAGTTCCTCGCCGGCGCGGGTGAAAGAGGCGTGCCGGG CGGCAGCCTCGAAGGCGCGCAGGGCATACAGCGGGGGCAGGCGACGGGTCATTGGGGAATTACCTCTTTCATGACTTTTACTCATGCCTGGCATCTTGTT TTTCCTTTTGTGGAGCCATGCCAGTCGCACCGAGAATAGCCGCATTCTCAACGCCGACAGGCCATCGCGGCAACCATCTCCTCCTGAGCCTTACTCATCC
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| DNA Sequence for Gene |
>V557_03411
ATGTCCTCGCCATCCCTCGTCGAACTCAAAGCCATCCTGCGCCTGGCGGGCCCGTTGATCGCCGCCCAGCTGGCCTATGTCGCCATGGTCTTCACCGACA CCGTGATGATGGGCAAGCTCGGCCCCGACGCGCTGGCCGCCGGCGGCCTGGGCGCGGTCAGCTACGCCTTCGTCTCGACGTTCTGTGTCGGCGTGGTGGC AGCGGTCGGCAACCTGGTGGCGATCCGTCACGGCTGCGACGACGCCGCTGGCGCCGCCGCGGCCGCTCGCTCCGGACTCTGGGTCGGCGCCGCGCTGGCC CTGGCCGCCGGCCTGCTGCTATGGAACCTGCGGCCGCTGCTCCTGGTCTTCGGCCAGGCGCCGCAGACGGTGGACGGCGCCATGCAGTTCCTCCACAGCC TGACATTCGCCCTGCCCGGCTACATGGCCTTCATGGTCCTGCGCGGCTTCACCAGCGCCATCGACCGCGCCGGCCCGGTGATGGCGATCAGCGTGCTCGG CGCGCTGGCCAACCTGGCTCTCAACTATTCCTTCATAGAAGGCCTGTTCGGCCTGCCGCGCCTGGGCCTGGCCGGTATCGGCCTGGTCACCGCCCTCGTC ATGAACTGCATGCCGCTGCTGCTGGCCCTGTATATCCGCCTGCAGCCGGCCTATACCGAGTACTCGCTGCTGCGCGGACTGGGACGGCCGCAGCGGGCGA TGGTCGAGGAGATACTGCGCCTGGGGCTGCCCATCGGTGGCACCTACGCGGTGGAGTCGGGGATGTTCACGGTCGCCACCCTGTGCATGGGCATCATCGG CGATCACGCCCTGGCCGCGCACCAGATCGCCATCCAGGCGGTATACGTGGCGTTCATGGTGCCGGTGGGGTTGTCGTACGCCACCACCTACCGCATCGGC CAGCATTTCGGCGCCGGCCGCCTGCTCGAAGCACGCCGCGCCGGGCGTGTCGGCATCGGCTTCGGCGCGCTGTGCATGCTGCTCTTCGCCGGGCTCTTCT GGTGGATGCCGGAGGCCATCATCGGCCTGTTCCTCGACCGCGACGCCCCGGCCAACCGGGAGGTGGCCGCGATGGCCGTCTCGCTGCTGGCGATCGCCGC CTGGTTCGAGCTGTTCGACGGCACCCAGAACGTCGCCATGGGCGCGATCCGCGGTCTCAAGGACGCCCGCACCACCTTCCTGGTCGGCCTGGCCTGCTAC TGGCTGGTCGGCGTGCCGCTGGCCTGCCTGCTGGCGTTCGCGGCCGGCTGGGGCGCCGCGGGCGTCTGGTGGGGGCTGGCCGGCGGCCTGGCCTGCGCGG CCATCGGCCTGACCCTGGCCTTCGAGTGGAAGACCGCGCGGTTGCTGCCGAAAGCCACGGCCAGCGAGGCGTCGGCGCTCAATTGCCGAGCGGCTGGCCG CGGTGCGCCGAGCGCTCGCCGATGCCCAGGAAACGCGCCAGTTCCGCCAACGGCAGCGGCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGTAGCCCTGCACCTGGTCGCAACCGAAATCGCGCAACTGCTCCTGCTGGCGCAGGGTCTCCACGCCTTCGGCAACCACTTCCAGGTTGAGGTTGTG CGCCAGGTTGATCATCGCCCGCACCAGTTGGAAGTTTTCCGCCCGCTGGTCCATGCCGCCGACGAAGCTGCGGTCGATCTTCAACAGGGTGATCGGCAGG CTATTGAGGTGGACGAAGGACGAGAAACCGGTGCCGAAGTCGTCCAGCGAAAAGCGCACGCCCAGTTGGCCGAGCGCCTGCATGGTCTGCAGCACCTGGT CGCTGCGCCGCATCACGGCGGTCTCGGTCAGTTCGAACTCGAGCCAGCGCGCGTCGACGCCGTGCTCTTCGATCAACCGTTGCAGGGTCGGCAGCAACTG GCTGTCCTGGAACTGGCGGAACGACAGGTTCACCGCCATGTGCAACGGCTCCAGGCCGCGCCCGTTGAGCCACTGCATGTCGCGCAGGGCGCGGGCGATG
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| Amino Acid Sequence |
>multidrug efflux protein NorA
MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVSTFCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWVGAALA LAAGLLLWNLRPLLLVFGQAPQTVDGAMQFLHSLTFALPGYMAFMVLRGFTSAIDRAGPVMAISVLGALANLALNYSFIEGLFGLPRLGLAGIGLVTALV MNCMPLLLALYIRLQPAYTEYSLLRGLGRPQRAMVEEILRLGLPIGGTYAVESGMFTVATLCMGIIGDHALAAHQIAIQAVYVAFMVPVGLSYATTYRIG QHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFWWMPEAIIGLFLDRDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTTFLVGLACY WLVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLPKATASEASALNCRAAGRGAPSARRCPGNAPVPPTAAAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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