Strain | Pseudomonas aeruginosa BWH052 adTvf-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTGTCCGCTGGAGTTCCTGGATCTGGCTCACGATGAGACCAACCAGGAGTGGCGAGACCGTCTGACGCAAGAACACCAAGCCTGACCGCACCAACCACT TCCCTTGAGGGGCTCCCTCAAGGGCGCTCCTCGTCTACCACCAGGAGCACACCATGAACCCACTGTTCACCAACCTCACCCAGGAAACCCTCGCCTACCT CGAGGATCAACTGTCCAACAACGACGTCGCCGGCGACGACGAGCTCATCGACCTGTTCATCGAGGAGCTGTCGCTGACCTTGGAGCAGGCGGAAGCGGCT GTCGCGCTACGCGATCAGTACCTCTGCCAGGTCTTCCTGAACGGCCAAGGGCCGCTGCACCAAGACGATGGGCTGAGCTTCGACCCTCACACCAAGAGCG TTCGGTAACCACCACGCTCCCCTGCACCAGTTGGACTACACCCCCGAGGGGCTTCACCGCCCCTCGAGGGCGGCGTGGCTCCTCCTTCCAGGAGGTTCCT
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DNA Sequence for Gene |
>V553_05637
ATGCCCAGTCCCACCCCGCTCTACCAGATCGAAGAGTGCCCAGACCTGTACGTCGACGCCTGCGTGTGCGACGAGCAGCGCAACCTGGTCTTTCTTTCGG CCTGGGGCCGCGACACCGTGACACAAGAGTTCCTGGCCAGGCTGACGCTGGGCCGGGAAGAAAATGGCATCGACCATTTCCACATCATCGTGGACGGCCG CCGCTTACCTGTCTTCCCAAACCAGGATCTCCTGGAGAAACGCACCACCCGCCAGTTCCGCGGCACGTTGTTCGGCAGCCTGCTCAATCTTTGGCTGTTC GATCGGCGCGCCTCGGCGCCCGACCGAGGCAATCACCTCGCCTTCGCACTCCTGCAGCGCGATGAGGATCCACACCAGAGGCTCTGGCCGCTGGTGATGG AAACCTGTCCGCTCCCCCTCCTGCAGCACTGGCGCGAGCCGGTGATGGAGGTCCTCACCCAGCACCAGATGTTGACTGCCCTACCCGGGACGATCGGCAA CGTCTGCGCCTGGCGACTCGCCCTGCGGGTCGACGTGCTCGAGCCCACTCTCGGTGAGCTGATCCGCGAAAGCATTCTTACCACCGATGCTCAGGCGCAA GCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATCCCTCTCAGACTCAAGGAGGCCCCATGGCCCTCATGTTCCCGCGCTTGGCGCGCAACTTTGCACGCAACGGCTACTTCCCTACCGATGAGGTCAC CCTCGAACGCGCTCTGCAGGCCCTCGCTCCCGCCCCGTCGGGCAGGATGAGGATCTGTGATCCCTGCGCCGGTGAGGGGGTTGCCCTGGCTGAGGCAGCA CACATCCTCGGCCGCGACAAGGTCCAAGCCCTCGCTGTTGAGTACGACCGCGAGCGCGCCGACCATGCTCGAGGCTTGCTTGACCGAGTGCTGCACAGTG ACCTTTTCGACACCATGATCAGCAGGCAGTCGTTCGGACTGCTCTGGCTCAACCCGCCTTATGGCGACCTGGTGGCGGACCACTCCGGTGCGTCGCAGTA CCAGGGCAGCGGTCGCAGGCGTCTGGAGAAAGCGTTCTACCAGCGCTGCCTGCCGTTGCTGCAGTACGGCGGCGTCATGGTCCTGATTGTTCCTCACTAC
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Amino Acid Sequence |
>hypothetical protein
MPSPTPLYQIEECPDLYVDACVCDEQRNLVFLSAWGRDTVTQEFLARLTLGREENGIDHFHIIVDGRRLPVFPNQDLLEKRTTRQFRGTLFGSLLNLWLF DRRASAPDRGNHLAFALLQRDEDPHQRLWPLVMETCPLPLLQHWREPVMEVLTQHQMLTALPGTIGNVCAWRLALRVDVLEPTLGELIRESILTTDAQAQ A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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