Pseudomonas syringae UB0390, IV03_RS22475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACTTCCAGCAGGTCGGCGGCCTGGAGTGCTACCCGGTCACCGGCGAAATCACTTATGGCCTCGAGCGTCTGGCGATGTACCAGCAGGGCGTGGACTCGG TCTACGATCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTGACCTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAACA CGCCAACGTCGACAAGCTGTTCGAACTGTTCGACTTCTACGAAAGCGAAGCCGCACGCCTGATCGAGCTGGAGCTGCCATTGCCCGGCTACGAAATGGTC CTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGACGGCGCGTCAGCAATACATCCTGCGCGTACGCACGCTGGCCCGTT CGGTGGCTCAGGCCTACCTGCAGGCCCGGGCCCGCCTCGGCTTCCCGATGGCGCCGCCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAGCGCA
DNA Sequence for Gene
>IV03_RS22475
ATGAGTGCTCAAGATTTTCTGGTCGAACTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCGCTGGCGGATGCGTTTCTCGCCGGTATTGAAAAAG GCCTCGCAGGCGCAGGTCTGACCTACAGCGCCAAACAGGTATACGCCGCACCGCGTCGTCTGGCAGTGCTGATTACCGCACTGGCCACGCAGCAACCGGA TCGCAGCGTCAACCTCGACGGCCCACCGCGCCAGGCAGCGTTCGATGCCGACGGTAACCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTC GACCTGAGCGAAATCGATCAGAGCGGCCCGAAACTGCGTTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCCCTGTTGCCGACCATCGTCGAAGACT CGCTGAACGACCTGCCGATTGCCAAGCGCATGCGCTGGGGCGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTGGTGATGCTGTTCGGTGATCA GGTGGTGGACTGCACGATCCTCGCCCAGAGCGCGGGTCGCCATTCGCGCGGTCATCGCTTCCATCATCCTCAAGACGTACGCATTTCTTCGCCTGCCGCT TACCTCAGCGACCTGCGCGCCGCTCATGTATTGGCCGACTTCAACGAACGTCGTCAGATCATCAGCAAGCGCGTCGACGAGCTGGCCACCCAACAGGAAG GCACCGCCATCGTGCCGCCAAGCCTGCTGGACGAAGTGGCCGGTCTGGTCGAGTGGCCGGTTCCGCTGGTGTGCTCGTTCGAAGAGCGCTTCCTGGAAGT CCCTCAGGAAGCCTTGATTACCACCATGCAGGACAACCAGAAATACTTCTGCCTGCTGGATGTAGACGGCAAGCTGCTACCGCGCTTCATCACCGTGGCC AACATCGAGAGCAAGGACCCGGCACAGATCATCGCCGGTAACGAGAAGGTGGTTCGTCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGA AACAGAAGCTGGAAACTTTCAACGATCGCCTGAAGAACGTCGTGTTCCAGGCTCAGTTGGGCAGCGTGTTCGACAAGGCCGAGCGCGTGTCGAAACTGGC CGCTTACATCGCACCTCGCATCGGTGGCGACGCCAAGCGTTCTGCACGTGCCGGCCTGCTGTCCAAGTGCGACCTGTCGAGCGAGATGGTCGGCGAGTTT CCGGAAATGCAGGGCATTGCCGGTTATTACTATGCCAAGGCCGACGGCGAGCCTGAAGATGTCGCACTGGCGCTCAACGAGCAGTACATGCCACGTGGCG CGGGTGCCGAACTGCCGACCACGCTGACCGGTGCTGCGGTGGCCATCGCTGACAAGCTCGACACGCTGGTCGGGATCTTCGGCATCGGCATGCTGCCCAC CGGCAGCAAGGACCCCTATGCACTGCGTCGTGCAGCACTGGGCATCCTGCGTATTCTGATCGAGAAAAAACTCGACCTGAACCTGATCGAAACGGTGAAA TTCGCTGTCACGCAGTTCGGTGCGAAGATCAAGCCAGCCGGTCTTGCAGAGCAGGTCCTCGACTTCATCTTCGATCGTCTTCGCGCGCGTTATGAAGACG AAGGCGTCGACGTGGCGGTGTACCTCTCGGTGCGTGCCCTGCAACCTGCTTCGGCGCTGGACTTCGATCAGCGCGTCCAGGCGGTCCAGGCCTTCCGCAA ACTGCCACAGGCCGCTGCACTGGCCGCAGTGAACAAGCGTGTCTCGAACCTGCTGAGCAAGGCAGAGGGCAGCATCGCCCAGACCGTCGAGCCCAAGTAT TTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCCATCCAGCAGGCCGATCACGCGATCCAGCCTATGGCTGCCGAGCGTCAGTACAGCGAATCGCTGG CGCGTCTGGCAATGTTGCGTGAGCCGGTCGATGCGTTCTTCGAGGCAGTAATGGTTAACGCGGAAGACGCCAATGTGCGTGCCAACCGTTATGCCCTGTT GTCGCGTTTGCGCGGCCTGTTCCTCGGCGTCGCCGATATCTCGCTGCTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAAGGAATCGCTGTGAAACTGCTGATACTCGATAGGGATGGCGTGATCAATCATGACTCCGACGCTTACATAAAGTCGGTGGCGGAGTGGCTGCCCATTC CTGGCTCGATCGAAGCTATCGCAGCGCTGAGCAAGGCCGGCTGGACGGTGGCCGTCGCCACCAACCAGTCGGGCATTGCCCGAGGTTATTATGATCTGGC CACTCTGGACGCCATGCACGTGCGCTTGCGCAAGCTGGTGGCGGAGCAGGGCGGCGAGGTTGGTTTGATCGTCTATTGCCCGCATGGGCCAGACGATGGC TGTAACTGCCGCAAGCCCAGACCCGGCATGCTGCAGGCCATCGCCCGTCATTACGCAGCGGACCTCAAAGGTCTCTGGTTCGTGGGCGACAGCAAGGGTG ACCTGCAGGCCGCATTGGCCGTCGATTCTCAGCCGGTGCTGGTGATGACCGGCAAAGGACGCAAGACGATGGAAGGCGGAGTGCCGGCAGGCACATTGAT
Amino Acid Sequence
>glycine-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGV DLSEIDQSGPKLRYSQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKEEFVRPTQWLVMLFGDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAA YLSDLRAAHVLADFNERRQIISKRVDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA NIESKDPAQIIAGNEKVVRPRLTDAEFFFKQDKKQKLETFNDRLKNVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAKRSARAGLLSKCDLSSEMVGEF PEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVK FAVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKLPQAAALAAVNKRVSNLLSKAEGSIAQTVEPKY FDNANEFSLYSAIQQADHAIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site