Pseudomonas putida S16, PPS_0946

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppt02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12911	N-terminal TM domain of oligopeptide transport permease C	IPR025966	Oligopeptide transport permease C-like, N-terminal domain	9	61	3.7E-13
PANTHER	PTHR43386	OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC	-	-	15	290	2.8E-89
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	80	287	7.8E-22
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	85	272	1.11E-27
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	90	272	4.10633E-17
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	108	291	7.6E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.