Pseudomonas sp. URMO17WK12:I8, F639_RS0125245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00011.11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAGAGTTGGGGGACAGCGGCAACGCGCCTGCGCGGCCGCATTTTGCCGAATTCATGGTGCGCGCCGGTCACGTCAAGGACCGCGGCGAGGCCTTTCGC AAGTGGCTGGGGGCCGGCAAGCTGGGCGACGTCAAGCAGCACTGGCCAACCCTGGACGAAACTGTCGCCACCTTGCGCCAGTCCAACGCCTGGGTGAGCC TTGCGCATCCCATGCACTACGATCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGCGGGCAGGCACTTGAAGTGGTCAACGG GATGATGCCGGCCGAGCAGGTGGGCACGATGTCCATCCTTACCCGTGAGTTCGGCCTGCTGGCAAGCGCTGGCAGCGATTTCCACGGCCCCGGCACCTGG GGCGAGATCGGTGCCTACCGGCCATTGCCCGAGGACTTGCCACCTCTGTGGCGTCGATTCAGCCATGAACAGCCTATGGCGCTATGAACAGGAAGACTTC
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| DNA Sequence for Gene |
>F639_RS0125245
GTGAGCCAATTTTTCCAGATTCATCCGGAGAACCCACAGCCGCGCCTGATTCGCCAGGCGGTGGAGATCATCCGCAAGGGTGGGGTGGTGGTCTATCCGA CTGACTCGGCCTATGCCCTGGGTTGCCAGATCGGCGACAAGGCAGCAATCGAGCGGGTGCGCCGTCTGCGCGGCCTGGACAAGACCCACAACTTCACCCT GATGTGTTGCGACATGTCGCAGCTGGGGCTGTATGCCAAGGTCGACACCGGCACCTTCCGCCTGCTCAAGGCCCATGTGCCGGGGCCGTACACCTTCATC CTCAACGGTACCCGCGAAGTGCCGCGCCTGCTGCTGCATGAAAAGCGCCGCACCATTGGCTTGCGCGTGCCGGACCACGCCATCACGCTGGCGTTGCTGG CCGAATTGGGCGAGCCGTTGATGAGCGTGAGCCTGATCCTGCCGGGCGACACCGAGCCAATGACCGACCCCTACGAGATTCGCGAGCGCCTGGAGCACCA TGTCGACCTGGTCATCGATGGCGGCTTCGGCGACCTCAAGGCCTCGACCATTATCGACTTGTCCGGCGACGAGCCTGAACTGATCCGTGAAGGCTGCGGC GACCCTACGCCGTTCATGGTCAACGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCAGGTGGAAGCACCCGAGGCAGCGGCCGAACAGGCGGCCGTGCAACCAGAATTGCCCCCCCAGCAGTTGCAGCTGGCCCTGGTCTACGGTGAAGCGCT GACCGAGTTGCCGCTGGACCTTTACATCCCGCCCGACGCCCTGGAAGTCATCCTCGAAGCGTTCGAGGGCCCGCTGGACCTGCTGCTGTACCTGATCCGC AAGCAGAACATCGACATCCTCGACATCCCGGTGGCGGAAATCACCCGCCAGTACATGGGCTACGTCGAGCTGATGAAGAGCGTGCGCCTGGAGCTGGCGG CCGAATACCTGGTGATGGCGGCCATGCTCGCCGAGATCAAGTCGCGCATGCTGCTGCCGCGCTCGGCCGCGATCGAGGAAGAAGAGGGCGACCCACGCGC CGAATTGATCCGCCGCCTGCAGGAGTACGAGCGTTTCAAGGCCGCCGCCGAGGGCATCGACGAGCTGCCACGGGTTGGCCGCGAGATTGTCGTACCGCGC
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| Amino Acid Sequence |
>hypothetical protein
MSQFFQIHPENPQPRLIRQAVEIIRKGGVVVYPTDSAYALGCQIGDKAAIERVRRLRGLDKTHNFTLMCCDMSQLGLYAKVDTGTFRLLKAHVPGPYTFI LNGTREVPRLLLHEKRRTIGLRVPDHAITLALLAELGEPLMSVSLILPGDTEPMTDPYEIRERLEHHVDLVIDGGFGDLKASTIIDLSGDEPELIREGCG DPTPFMVNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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